Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10863870	0.84[ASN][1000 genomes]
rs10863874	0.98[AFR][1000 genomes];0.95[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11119662	0.98[ASN][1000 genomes]
rs11485203	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11578692	0.81[AFR][1000 genomes]
rs11579078	0.83[AFR][1000 genomes]
rs11582507	0.98[AFR][1000 genomes]
rs12722738	0.95[AFR][1000 genomes]
rs12750762	0.85[AFR][1000 genomes]
rs1393026	0.81[AFR][1000 genomes];0.80[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1501551	0.83[AFR][1000 genomes]
rs2221250	0.96[AFR][1000 genomes]
rs33985151	0.83[AFR][1000 genomes]
rs35711968	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4314946	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4638187	0.81[AFR][1000 genomes]
rs61850226	0.97[AFR][1000 genomes]
rs6669457	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6678283	0.95[AMR][1000 genomes];0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6702598	0.81[AFR][1000 genomes]
rs7414286	0.83[AFR][1000 genomes]
rs7517771	0.81[AFR][1000 genomes];0.94[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7519090	0.89[AFR][1000 genomes]
rs7535286	0.94[AMR][1000 genomes];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7536519	0.84[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv4410	chr1:211193724-211210571	Enhancers Weak transcription Flanking Active TSS Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:211182800-211228600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr1:211184800-211198600	Weak transcription	Brain Hippocampus Middle	brain
3	chr1:211187000-211198200	Weak transcription	Brain Angular Gyrus	brain
4	chr1:211187600-211198200	Weak transcription	Brain Inferior Temporal Lobe	brain
5	chr1:211190600-211198800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
6	chr1:211192400-211198400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
7	chr1:211192600-211198400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
8	chr1:211192600-211199800	Weak transcription	Brain Substantia Nigra	brain
9	chr1:211192600-211209000	Weak transcription	HSMMtube	muscle
10	chr1:211194400-211209200	Weak transcription	HSMM	muscle

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