Variant report

Variant	rs2429449
Chromosome Location	chr17:44296224-44296225
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 988 )
Associated
traits (count: 6 )

rSNPs within LD-proxies of this variant (count:318)

rs_ID	r²[population]
rs10514897	0.81[AFR][1000 genomes]
rs10514898	0.81[AFR][1000 genomes]
rs10514901	0.81[AFR][1000 genomes]
rs10514903	0.81[AFR][1000 genomes]
rs10514904	0.81[AFR][1000 genomes]
rs1107820	0.81[AFR][1000 genomes]
rs11079729	0.81[AFR][1000 genomes]
rs1117253	0.81[AFR][1000 genomes]
rs1122380	0.81[AFR][1000 genomes]
rs1122381	0.81[AFR][1000 genomes]
rs12150064	0.81[AFR][1000 genomes]
rs12150087	0.81[AFR][1000 genomes]
rs12150090	0.81[AFR][1000 genomes]
rs12150127	0.81[AFR][1000 genomes]
rs12150162	0.81[AFR][1000 genomes]
rs12150319	0.81[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs12150336	0.81[AFR][1000 genomes]
rs12150344	0.81[AFR][1000 genomes]
rs12150447	0.81[AFR][1000 genomes]
rs12150542	0.81[AFR][1000 genomes]
rs12150551	0.81[AFR][1000 genomes]
rs12150558	0.81[AFR][1000 genomes]
rs12150570	0.81[AFR][1000 genomes]
rs12150611	0.81[AFR][1000 genomes]
rs12150625	0.81[AFR][1000 genomes]
rs12150627	0.81[AFR][1000 genomes]
rs12150628	0.81[AFR][1000 genomes]
rs12185225	0.81[AFR][1000 genomes]
rs12185243	0.81[AFR][1000 genomes]
rs1358439	0.81[AFR][1000 genomes];0.84[AMR][1000 genomes]
rs1468240	0.81[AFR][1000 genomes]
rs1468241	0.81[AFR][1000 genomes]
rs1476554	0.81[AFR][1000 genomes]
rs17574796	0.81[AFR][1000 genomes]
rs17574824	0.81[AFR][1000 genomes]
rs17575423	0.81[AFR][1000 genomes]
rs17575507	0.81[AFR][1000 genomes]
rs17575556	0.81[AFR][1000 genomes]
rs17575683	0.81[AFR][1000 genomes]
rs17575773	0.81[AFR][1000 genomes]
rs17575822	0.81[AFR][1000 genomes]
rs17575850	0.81[AFR][1000 genomes]
rs17576165	0.81[AFR][1000 genomes]
rs17576200	0.81[AFR][1000 genomes]
rs17576631	0.81[AFR][1000 genomes]
rs17576695	0.81[AFR][1000 genomes]
rs17576709	0.81[AFR][1000 genomes]
rs17576779	0.81[AFR][1000 genomes]
rs17576842	0.81[AFR][1000 genomes]
rs17576870	0.81[AFR][1000 genomes]
rs17576954	0.81[AFR][1000 genomes]
rs17576989	0.81[AFR][1000 genomes]
rs17577024	0.81[AFR][1000 genomes]
rs17577052	0.81[AFR][1000 genomes]
rs17577094	0.81[AFR][1000 genomes]
rs17577159	0.81[AFR][1000 genomes]
rs17577313	0.81[AFR][1000 genomes]
rs17577447	0.81[AFR][1000 genomes]
rs17577496	0.81[AFR][1000 genomes]
rs17577650	0.81[AFR][1000 genomes]
rs17577877	0.81[AFR][1000 genomes]
rs17577954	0.81[AFR][1000 genomes]
rs17577975	0.81[AFR][1000 genomes]
rs17653193	0.81[AFR][1000 genomes]
rs17653211	0.81[AFR][1000 genomes]
rs17653255	0.81[AFR][1000 genomes]
rs17653836	0.81[AFR][1000 genomes]
rs17653889	0.81[AFR][1000 genomes]
rs17653998	0.81[AFR][1000 genomes]
rs17654016	0.81[AFR][1000 genomes]
rs17659731	0.81[AFR][1000 genomes]
rs17659743	0.81[AFR][1000 genomes]
rs17659881	0.81[AFR][1000 genomes]
rs17659953	0.81[AFR][1000 genomes]
rs17660017	0.81[AFR][1000 genomes]
rs17660065	0.81[AFR][1000 genomes]
rs17660132	0.81[AFR][1000 genomes]
rs17660167	0.81[AFR][1000 genomes]
rs17660251	0.81[AFR][1000 genomes]
rs17660294	0.81[AFR][1000 genomes]
rs17660337	0.81[AFR][1000 genomes]
rs17660398	0.81[AFR][1000 genomes]
rs17660464	0.81[AFR][1000 genomes]
rs17660488	0.81[AFR][1000 genomes]
rs17660595	0.81[AFR][1000 genomes]
rs17660847	0.81[AFR][1000 genomes]
rs17660865	0.81[AFR][1000 genomes]
rs17660907	0.81[AFR][1000 genomes]
rs17660936	0.81[AFR][1000 genomes]
rs17661015	0.81[AFR][1000 genomes]
rs17661027	0.81[AFR][1000 genomes]
rs17661045	0.81[AFR][1000 genomes]
rs17661141	0.81[AFR][1000 genomes]
rs17661348	0.81[AFR][1000 genomes]
rs17661385	0.81[AFR][1000 genomes]
rs17664048	0.91[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs1918786	0.91[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs1918787	0.81[AMR][1000 genomes]
rs1918794	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs1966345	0.81[AFR][1000 genomes]
rs2141298	0.91[AFR][1000 genomes]
rs2266497	0.82[AMR][1000 genomes]
rs2316951	0.81[AFR][1000 genomes]
rs2316952	0.81[AFR][1000 genomes]
rs2316953	0.81[AFR][1000 genomes]
rs2316954	0.81[AFR][1000 genomes]
rs2316955	0.81[AFR][1000 genomes]
rs2469914	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2532229	0.91[AFR][1000 genomes]
rs2532233	0.91[AFR][1000 genomes]
rs2532239	0.91[AFR][1000 genomes]
rs2532276	0.91[AFR][1000 genomes]
rs2532277	0.90[AFR][1000 genomes];0.84[AMR][1000 genomes]
rs2532307	0.91[AFR][1000 genomes]
rs2532389	0.81[AFR][1000 genomes]
rs2532411	0.91[AFR][1000 genomes]
rs2532412	0.81[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs2532414	0.91[AFR][1000 genomes];0.84[AMR][1000 genomes]
rs2532416	0.91[AFR][1000 genomes];0.82[AMR][1000 genomes]
rs2532417	0.91[AFR][1000 genomes];0.82[AMR][1000 genomes]
rs2532418	0.91[AFR][1000 genomes];0.82[AMR][1000 genomes]
rs2532419	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2532423	0.91[AFR][1000 genomes];0.82[AMR][1000 genomes]
rs2668645	0.91[AFR][1000 genomes];0.82[AMR][1000 genomes]
rs2668653	0.83[AFR][1000 genomes];0.82[AMR][1000 genomes]
rs2668658	0.80[AMR][1000 genomes]
rs2668662	0.91[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs2668665	0.91[AFR][1000 genomes];0.82[AMR][1000 genomes]
rs2668668	0.83[AFR][1000 genomes];0.82[AMR][1000 genomes]
rs2668670	0.91[AFR][1000 genomes];0.82[AMR][1000 genomes]
rs2668691	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2668692	0.91[AFR][1000 genomes];0.82[AMR][1000 genomes]
rs2668694	0.91[AFR][1000 genomes];0.82[AMR][1000 genomes]
rs2668695	0.91[AFR][1000 genomes];0.82[AMR][1000 genomes]
rs2696445	0.81[AFR][1000 genomes];0.94[AMR][1000 genomes]
rs2696566	0.91[AFR][1000 genomes]
rs2696568	0.91[AFR][1000 genomes]
rs2696569	0.91[AFR][1000 genomes]
rs2696608	0.81[AFR][1000 genomes];0.84[AMR][1000 genomes]
rs2696610	0.91[AFR][1000 genomes];0.82[AMR][1000 genomes]
rs2696633	0.91[AFR][1000 genomes]
rs2696635	0.91[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs2696673	0.91[AFR][1000 genomes]
rs2732601	0.91[AFR][1000 genomes];0.82[AMR][1000 genomes]
rs2732605	0.91[AFR][1000 genomes];0.82[AMR][1000 genomes]
rs2732606	0.82[AMR][1000 genomes]
rs2732628	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs2732629	0.91[AFR][1000 genomes];0.82[AMR][1000 genomes]
rs2732630	0.91[AFR][1000 genomes];0.82[AMR][1000 genomes]
rs2732631	0.91[AFR][1000 genomes];0.82[AMR][1000 genomes]
rs2838	0.81[AFR][1000 genomes]
rs2942186	0.86[AMR][1000 genomes]
rs2942187	0.81[AFR][1000 genomes];0.92[AMR][1000 genomes]
rs2957296	0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs3087534	0.81[AFR][1000 genomes]
rs34043286	0.81[AFR][1000 genomes]
rs3912060	0.81[AFR][1000 genomes]
rs3912061	0.81[AFR][1000 genomes]
rs3912062	0.81[AFR][1000 genomes]
rs41382552	0.81[AFR][1000 genomes]
rs41437445	0.81[AFR][1000 genomes]
rs4471723	0.81[AFR][1000 genomes]
rs4548919	0.81[AFR][1000 genomes]
rs4581739	0.81[AFR][1000 genomes]
rs4608377	0.81[AFR][1000 genomes]
rs55653937	0.91[AFR][1000 genomes]
rs55669501	0.81[AFR][1000 genomes]
rs55672516	0.81[AFR][1000 genomes]
rs55690782	0.81[AFR][1000 genomes]
rs55692232	0.81[AFR][1000 genomes]
rs55714296	0.81[AFR][1000 genomes]
rs55780786	0.81[AFR][1000 genomes]
rs55790833	0.81[AFR][1000 genomes]
rs55802590	0.81[AFR][1000 genomes]
rs55825513	0.81[AFR][1000 genomes]
rs55831516	0.81[AFR][1000 genomes]
rs55864131	0.81[AFR][1000 genomes]
rs55885063	0.81[AFR][1000 genomes]
rs55893711	0.81[AFR][1000 genomes]
rs55900347	0.81[AFR][1000 genomes]
rs55909047	0.81[AFR][1000 genomes]
rs55929190	0.81[AFR][1000 genomes]
rs55947022	0.81[AFR][1000 genomes]
rs55955207	0.81[AFR][1000 genomes]
rs55972730	0.81[AFR][1000 genomes]
rs55987700	0.81[AFR][1000 genomes]
rs56100031	0.81[AFR][1000 genomes]
rs56119705	0.81[AFR][1000 genomes]
rs56257094	0.81[AFR][1000 genomes]
rs56273589	0.81[AFR][1000 genomes]
rs56318865	0.81[AFR][1000 genomes]
rs56323408	0.81[AFR][1000 genomes]
rs62060760	0.81[AFR][1000 genomes]
rs62060761	0.81[AFR][1000 genomes]
rs62060762	0.81[AFR][1000 genomes]
rs62060763	0.81[AFR][1000 genomes]
rs62060764	0.81[AFR][1000 genomes]
rs62060765	0.81[AFR][1000 genomes]
rs62060767	0.81[AFR][1000 genomes]
rs62060768	0.81[AFR][1000 genomes]
rs62060785	0.81[AFR][1000 genomes]
rs62060786	0.81[AFR][1000 genomes]
rs62060787	0.81[AFR][1000 genomes]
rs62060792	0.81[AFR][1000 genomes]
rs62060793	0.81[AFR][1000 genomes]
rs62060794	0.81[AFR][1000 genomes]
rs62060795	0.81[AFR][1000 genomes]
rs62060796	0.81[AFR][1000 genomes]
rs62060797	0.81[AFR][1000 genomes]
rs62060798	0.81[AFR][1000 genomes]
rs62060799	0.81[AFR][1000 genomes]
rs62060800	0.81[AFR][1000 genomes]
rs62060801	0.81[AFR][1000 genomes]
rs62060802	0.81[AFR][1000 genomes]
rs62060809	0.81[AFR][1000 genomes]
rs62060810	0.81[AFR][1000 genomes]
rs62060812	0.81[AFR][1000 genomes]
rs62060834	0.81[AFR][1000 genomes]
rs62060835	0.81[AFR][1000 genomes]
rs62060836	0.81[AFR][1000 genomes]
rs62060837	0.81[AFR][1000 genomes]
rs62060838	0.81[AFR][1000 genomes]
rs62060839	0.81[AFR][1000 genomes]
rs62060840	0.81[AFR][1000 genomes]
rs62060841	0.81[AFR][1000 genomes]
rs62060842	0.81[AFR][1000 genomes]
rs62060844	0.81[AFR][1000 genomes]
rs62060846	0.81[AFR][1000 genomes]
rs62060847	0.81[AFR][1000 genomes]
rs62060850	0.81[AFR][1000 genomes]
rs62060851	0.81[AFR][1000 genomes]
rs62060852	0.90[AFR][1000 genomes]
rs62060853	0.81[AFR][1000 genomes]
rs62060855	0.81[AFR][1000 genomes]
rs62060856	0.81[AFR][1000 genomes]
rs62060858	0.81[AFR][1000 genomes]
rs62060859	0.81[AFR][1000 genomes]
rs62060946	0.90[AFR][1000 genomes];0.96[AMR][1000 genomes]
rs62060947	0.90[AFR][1000 genomes];0.96[AMR][1000 genomes]
rs62060952	0.96[AMR][1000 genomes]
rs62061766	0.81[AFR][1000 genomes]
rs62061767	0.81[AFR][1000 genomes]
rs62061770	0.81[AFR][1000 genomes]
rs62061771	0.81[AFR][1000 genomes]
rs62061772	0.81[AFR][1000 genomes]
rs62061788	0.81[AFR][1000 genomes]
rs62061789	0.81[AFR][1000 genomes]
rs62061790	0.81[AFR][1000 genomes]
rs62061791	0.81[AFR][1000 genomes]
rs62061792	0.81[AFR][1000 genomes]
rs62061793	0.81[AFR][1000 genomes]
rs62061795	0.81[AFR][1000 genomes]
rs62061796	0.81[AFR][1000 genomes]
rs62061798	0.81[AFR][1000 genomes]
rs62061799	0.81[AFR][1000 genomes]
rs62061802	0.81[AFR][1000 genomes]
rs62061803	0.81[AFR][1000 genomes]
rs62061807	0.81[AFR][1000 genomes]
rs62061808	0.81[AFR][1000 genomes]
rs62061809	0.81[AFR][1000 genomes]
rs62061810	0.81[AFR][1000 genomes]
rs62061811	0.81[AFR][1000 genomes]
rs62061812	0.81[AFR][1000 genomes]
rs62061814	0.81[AFR][1000 genomes]
rs62061815	0.81[AFR][1000 genomes]
rs62061816	0.81[AFR][1000 genomes]
rs62061817	0.81[AFR][1000 genomes]
rs62061818	0.81[AFR][1000 genomes]
rs62061821	0.81[AFR][1000 genomes]
rs62061822	0.81[AFR][1000 genomes]
rs62061849	0.81[AFR][1000 genomes]
rs62061850	0.81[AFR][1000 genomes]
rs62061851	0.81[AFR][1000 genomes]
rs62061852	0.81[AFR][1000 genomes]
rs62061853	0.81[AFR][1000 genomes]
rs62061854	0.81[AFR][1000 genomes]
rs62061856	0.81[AFR][1000 genomes]
rs62061858	0.81[AFR][1000 genomes]
rs62061859	0.81[AFR][1000 genomes]
rs62062133	0.81[AFR][1000 genomes]
rs62062134	0.81[AFR][1000 genomes]
rs62062136	0.81[AFR][1000 genomes]
rs62062137	0.81[AFR][1000 genomes]
rs62062322	0.81[AFR][1000 genomes]
rs62062323	0.81[AFR][1000 genomes]
rs62062324	0.81[AFR][1000 genomes]
rs62062325	0.81[AFR][1000 genomes]
rs62063163	0.81[AFR][1000 genomes]
rs62063164	0.81[AFR][1000 genomes]
rs62063165	0.81[AFR][1000 genomes]
rs62063166	0.81[AFR][1000 genomes]
rs62063171	0.81[AFR][1000 genomes]
rs62063172	0.81[AFR][1000 genomes]
rs62063174	0.81[AFR][1000 genomes]
rs62063200	0.81[AFR][1000 genomes]
rs62063202	0.81[AFR][1000 genomes]
rs62063203	0.81[AFR][1000 genomes]
rs62063208	0.81[AFR][1000 genomes]
rs62063234	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs62063670	0.81[AFR][1000 genomes]
rs62063671	0.81[AFR][1000 genomes]
rs62063672	0.81[AFR][1000 genomes]
rs62063673	0.81[AFR][1000 genomes]
rs62063675	0.81[AFR][1000 genomes]
rs62063676	0.81[AFR][1000 genomes]
rs62063677	0.81[AFR][1000 genomes]
rs62063678	0.81[AFR][1000 genomes]
rs62063680	0.81[AFR][1000 genomes]
rs62063682	0.81[AFR][1000 genomes]
rs62063683	0.81[AFR][1000 genomes]
rs62063684	0.81[AFR][1000 genomes]
rs62070911	0.90[AFR][1000 genomes];0.84[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs62073099	0.81[AFR][1000 genomes]
rs727425	0.81[AFR][1000 genomes]
rs876944	0.81[AFR][1000 genomes]
rs974291	0.81[AFR][1000 genomes]
rs974292	0.81[AFR][1000 genomes]
rs974293	0.81[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:670 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv817315	chr17:43651731-44351152	Enhancers ZNF genes & repeats Bivalent Enhancer Weak transcription Flanking Active TSS Genic enhancers Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	52 gene(s)	inside rSNPs	diseases
2	nsv529777	chr17:43653227-44351644	Weak transcription Enhancers Genic enhancers Bivalent Enhancer Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	52 gene(s)	inside rSNPs	diseases
3	nsv1067695	chr17:43655747-44351152	Weak transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	52 gene(s)	inside rSNPs	diseases
4	nsv529378	chr17:43655747-44351152	Enhancers Active TSS Strong transcription Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	52 gene(s)	inside rSNPs	diseases
5	nsv529778	chr17:43675408-44351152	Weak transcription Genic enhancers Enhancers Flanking Active TSS Bivalent Enhancer Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	48 gene(s)	inside rSNPs	diseases
6	nsv529780	chr17:43706686-44485971	Active TSS Strong transcription Enhancers Weak transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	49 gene(s)	inside rSNPs	diseases
7	nsv817460	chr17:43706886-44351152	Flanking Active TSS Bivalent Enhancer Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
8	nsv529278	chr17:43706886-44694283	Active TSS Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	55 gene(s)	inside rSNPs	diseases
9	nsv534157	chr17:43717703-44345038	Enhancers Strong transcription Active TSS Bivalent Enhancer Weak transcription Genic enhancers Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
10	nsv529794	chr17:43717703-44351152	Weak transcription Strong transcription Bivalent/Poised TSS Active TSS Enhancers Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
11	nsv948604	chr17:43741452-44364056	Strong transcription Flanking Active TSS Weak transcription Enhancers Bivalent/Poised TSS Active TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
12	nsv529795	chr17:43751674-44351152	Flanking Active TSS Strong transcription Enhancers Weak transcription Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
13	nsv949112	chr17:43763241-44364056	Weak transcription Transcr. at gene 5' and 3' Strong transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
14	nsv431716	chr17:43893020-44868187	Strong transcription Weak transcription Enhancers Active TSS Flanking Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	62 gene(s)	inside rSNPs	diseases
15	esv2751685	chr17:44004972-44789317	Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer Genic enhancers Strong transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	47 gene(s)	inside rSNPs	diseases
16	esv2751686	chr17:44039564-44364056	Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Strong transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
17	nsv431717	chr17:44075901-44809001	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
18	nsv471698	chr17:44079479-44378253	Strong transcription Weak transcription Enhancers Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
19	nsv431718	chr17:44094463-44873614	Weak transcription Strong transcription Transcr. at gene 5' and 3' Enhancers Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	55 gene(s)	inside rSNPs	diseases
20	esv2751687	chr17:44094471-44364056	Enhancers Strong transcription Active TSS Weak transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
21	nsv575144	chr17:44109474-44354796	Enhancers Strong transcription Active TSS Flanking Bivalent TSS/Enh Weak transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
22	nsv516807	chr17:44109474-44793283	Active TSS Weak transcription Strong transcription Flanking Active TSS Enhancers Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
23	nsv431719	chr17:44111853-44364056	Weak transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Strong transcription Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
24	esv2751688	chr17:44115107-44364056	Strong transcription Enhancers Genic enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
25	nsv431720	chr17:44115107-44364056	Strong transcription Weak transcription Active TSS Enhancers Genic enhancers Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
26	nsv1063349	chr17:44116860-44435442	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	36 gene(s)	inside rSNPs	diseases
27	esv2753137	chr17:44116950-44353885	Genic enhancers Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
28	nsv431723	chr17:44118999-44364056	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
29	nsv575149	chr17:44131305-44350090	Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
30	nsv575150	chr17:44131305-44354796	Weak transcription Active TSS Enhancers Flanking Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
31	nsv543359	chr17:44132076-44792529	Weak transcription Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Strong transcription Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
32	nsv431726	chr17:44135864-44364056	Weak transcription Flanking Active TSS Enhancers Strong transcription Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
33	esv1792966	chr17:44136000-44422977	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
34	nsv529718	chr17:44138513-44694283	Weak transcription Flanking Active TSS Enhancers Strong transcription ZNF genes & repeats Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
35	nsv916230	chr17:44138515-44694311	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
36	esv2751689	chr17:44139662-44364056	Weak transcription Enhancers Genic enhancers Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
37	esv2751690	chr17:44139662-44364056	Weak transcription Flanking Active TSS Enhancers Strong transcription Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
38	esv2751691	chr17:44139662-44795190	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	44 gene(s)	inside rSNPs	diseases
39	esv2751692	chr17:44139662-44811116	Weak transcription Enhancers Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	44 gene(s)	inside rSNPs	diseases
40	esv2751693	chr17:44139682-44364056	Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
41	esv2751694	chr17:44139682-44789285	Enhancers Genic enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
42	esv2751695	chr17:44139682-44801340	Enhancers Active TSS Weak transcription Strong transcription Bivalent Enhancer Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	44 gene(s)	inside rSNPs	diseases
43	nsv908311	chr17:44140748-44329221	Weak transcription Strong transcription Active TSS Transcr. at gene 5' and 3' Enhancers Genic enhancers ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
44	nsv470589	chr17:44140748-44350089	Enhancers Weak transcription Genic enhancers Strong transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
45	nsv575152	chr17:44140748-44350090	Flanking Active TSS Active TSS Bivalent/Poised TSS Enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
46	nsv908312	chr17:44140748-44354796	Weak transcription Enhancers Strong transcription Active TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
47	nsv908313	chr17:44140748-44368215	Weak transcription Strong transcription Active TSS Enhancers Genic enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	34 gene(s)	inside rSNPs	diseases
48	nsv908314	chr17:44140748-44375017	Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	34 gene(s)	inside rSNPs	diseases
49	nsv908315	chr17:44140748-44788310	Weak transcription Bivalent/Poised TSS Enhancers Strong transcription Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
50	nsv543362	chr17:44141175-44792529	Weak transcription Active TSS Enhancers Flanking Active TSS Genic enhancers Strong transcription ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases

mRNA abundance (count:6)

SNP	Gene	Cis/trans	Tissue	Source
rs2429449	LOC644246	Cis_1M	lymphoblastoid	RTeQTL
rs2429449	ARHGAP27	Cis_1M	lymphoblastoid	RTeQTL
rs2429449	LRRC37A4	Cis_1M	lymphoblastoid	RTeQTL
rs2429449	LRRC37A3	Cis_chr	lymphoblastoid	RTeQTL
rs2429449	MAPK8IP1	trans	lymphoblastoid	RTeQTL
rs2429449	ARL17	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:117 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:44271600-44302200	Weak transcription	Lung	lung
2	chr17:44271800-44302000	Weak transcription	Left Ventricle	heart
3	chr17:44271800-44302200	Weak transcription	Esophagus	oesophagus
4	chr17:44272200-44302000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
5	chr17:44272400-44302000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
6	chr17:44272600-44302000	Weak transcription	Primary B cells from peripheral blood	blood
7	chr17:44274000-44301600	Weak transcription	HUVEC	blood vessel
8	chr17:44277600-44302200	Weak transcription	NH-A	brain
9	chr17:44278600-44302000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
10	chr17:44278600-44302000	Weak transcription	Right Atrium	heart
11	chr17:44279600-44301600	Weak transcription	Ovary	ovary
12	chr17:44280600-44301600	Weak transcription	Colonic Mucosa	Colon
13	chr17:44280800-44301600	Weak transcription	Duodenum Mucosa	Duodenum
14	chr17:44281600-44301600	Weak transcription	Pancreas	Pancrea
15	chr17:44284000-44296800	Weak transcription	Cortex derived primary cultured neurospheres	brain
16	chr17:44284200-44302200	Weak transcription	Primary hematopoietic stem cells	blood
17	chr17:44286200-44302000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
18	chr17:44286200-44302400	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
19	chr17:44286800-44301600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
20	chr17:44289000-44302600	Weak transcription	Skeletal Muscle Male	skeletal muscle
21	chr17:44290400-44301000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
22	chr17:44290400-44301400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
23	chr17:44290400-44301600	Weak transcription	Hela-S3	cervix
24	chr17:44290600-44298400	Strong transcription	A549	lung
25	chr17:44290600-44301400	Weak transcription	K562	blood
26	chr17:44290600-44301600	Weak transcription	NHLF	lung
27	chr17:44290600-44301600	Weak transcription	Osteobl	bone
28	chr17:44290600-44302400	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
29	chr17:44290600-44302600	Weak transcription	Fetal Heart	heart
30	chr17:44290800-44302000	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
31	chr17:44290800-44302600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
32	chr17:44290800-44302600	Weak transcription	Stomach Mucosa	stomach
33	chr17:44291000-44297200	Strong transcription	iPS-18 Cell Line	embryonic stem cell
34	chr17:44291200-44298400	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
35	chr17:44291400-44297200	Strong transcription	NHEK	skin
36	chr17:44291600-44296400	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
37	chr17:44291600-44298000	Strong transcription	HUES48 Cell Line	embryonic stem cell
38	chr17:44291600-44298200	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
39	chr17:44291600-44298800	Strong transcription	H1 Cell Line	embryonic stem cell
40	chr17:44291600-44299400	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
41	chr17:44292000-44298400	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
42	chr17:44292000-44298800	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
43	chr17:44292000-44298800	Strong transcription	HUES6 Cell Line	embryonic stem cell
44	chr17:44292000-44299600	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
45	chr17:44292400-44297800	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
46	chr17:44292600-44298400	Strong transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
47	chr17:44292600-44302200	Weak transcription	Spleen	Spleen
48	chr17:44292800-44301400	Weak transcription	Brain Inferior Temporal Lobe	brain
49	chr17:44292800-44301600	Weak transcription	Brain Germinal Matrix	brain
50	chr17:44292800-44302800	Weak transcription	Fetal Lung	lung

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