Variant report

Variant rs2532229
Chromosome Location chr17:44277265-44277266
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:106 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:44271600-44277800 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr17:44271600-44302200 Weak transcription Lung lung
3 chr17:44271800-44278200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr17:44271800-44278800 Weak transcription Ovary ovary
5 chr17:44271800-44279200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr17:44271800-44280400 Weak transcription Gastric stomach
7 chr17:44271800-44285600 Weak transcription H9 Cell Line embryonic stem cell
8 chr17:44271800-44291600 Weak transcription Fetal Muscle Trunk muscle
9 chr17:44271800-44293400 Weak transcription Placenta Placenta
10 chr17:44271800-44302000 Weak transcription Left Ventricle heart
11 chr17:44271800-44302200 Weak transcription Esophagus oesophagus
12 chr17:44272000-44279200 Weak transcription Right Ventricle heart
13 chr17:44272200-44283200 Weak transcription Fetal Brain Male brain
14 chr17:44272200-44286000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
15 chr17:44272200-44302000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
16 chr17:44272400-44279200 Weak transcription Colonic Mucosa Colon
17 chr17:44272400-44283000 Weak transcription Brain Anterior Caudate brain
18 chr17:44272400-44283200 Weak transcription Skeletal Muscle Female skeletal muscle
19 chr17:44272400-44285400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr17:44272400-44290000 Weak transcription Hela-S3 cervix
21 chr17:44272400-44294200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
22 chr17:44272400-44295800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
23 chr17:44272400-44302000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
24 chr17:44272600-44279400 Weak transcription Rectal Smooth Muscle rectum
25 chr17:44272600-44281600 Enhancers Primary T helper naive cells fromperipheralblood blood
26 chr17:44272600-44292600 Weak transcription Monocytes-CD14+_RO01746 blood
27 chr17:44272600-44302000 Weak transcription Primary B cells from peripheral blood blood
28 chr17:44272800-44277600 Enhancers Primary T helper cells PMA-I stimulated --
29 chr17:44272800-44283200 Weak transcription Brain Hippocampus Middle brain
30 chr17:44273000-44277400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
31 chr17:44273000-44277800 Enhancers Primary T killer memory cells from peripheral blood blood
32 chr17:44273000-44282800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
33 chr17:44273000-44283200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr17:44273000-44283200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr17:44273000-44283200 Weak transcription Brain Inferior Temporal Lobe brain
36 chr17:44273200-44277400 Weak transcription Duodenum Mucosa Duodenum
37 chr17:44273200-44277800 Enhancers Primary T killer naive cells fromperipheralblood blood
38 chr17:44273200-44279000 Weak transcription Fetal Intestine Large intestine
39 chr17:44273200-44282800 Weak transcription Fetal Stomach stomach
40 chr17:44273200-44283200 Weak transcription Primary B cells from cord blood blood
41 chr17:44273200-44283200 Weak transcription Primary hematopoietic stem cells blood
42 chr17:44273200-44283200 Weak transcription Brain Substantia Nigra brain
43 chr17:44273600-44277800 Weak transcription Pancreas Pancrea
44 chr17:44273600-44292600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
45 chr17:44274000-44283200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
46 chr17:44274000-44283200 Weak transcription Psoas Muscle Psoas
47 chr17:44274000-44285600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
48 chr17:44274000-44301600 Weak transcription HUVEC blood vessel
49 chr17:44274400-44277400 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
50 chr17:44274400-44279400 Enhancers Rectal Mucosa Donor 31 rectum

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