Variant report

Variant	rs2429440
Chromosome Location	chr17:44342563-44342564
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	USF2	chr17:44342431-44342624	K562	blood:	n/a	n/a
2	TAL1	chr17:44342343-44342655	K562	blood:	n/a	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr17:44268998..44273525-chr17:44341673..44346026,7	K562	blood:
2	chr17:43661803..43664232-chr17:44342561..44344320,3	K562	blood:

Variant related genes	Relation type
ENSG00000261575	TF binding region
ENSG00000262539	TF binding region
ENSG00000214401	Chromatin interaction
ENSG00000264070	Chromatin interaction
ENSG00000120071	Chromatin interaction

Extended variants
information (count: 1222 )
Associated
traits (count: 127 )

rSNPs within LD-proxies of this variant (count:371)

rs_ID	r²[population]
rs10221243	1.00[ASN][1000 genomes]
rs1029463	1.00[ASN][1000 genomes]
rs10514901	1.00[ASN][1000 genomes]
rs10514903	1.00[ASN][1000 genomes]
rs10514904	1.00[ASN][1000 genomes]
rs11079733	1.00[ASN][1000 genomes]
rs1122380	1.00[ASN][1000 genomes]
rs1122381	1.00[ASN][1000 genomes]
rs12150087	1.00[ASN][1000 genomes]
rs12150319	1.00[ASN][1000 genomes]
rs12150551	1.00[ASN][1000 genomes]
rs12150558	1.00[ASN][1000 genomes]
rs1358439	1.00[ASN][1000 genomes]
rs1468240	1.00[ASN][1000 genomes]
rs1476554	1.00[ASN][1000 genomes]
rs16940904	1.00[ASN][1000 genomes]
rs1706725	1.00[ASN][1000 genomes]
rs17576165	1.00[ASN][1000 genomes]
rs17576200	1.00[ASN][1000 genomes]
rs17576631	1.00[ASN][1000 genomes]
rs17576695	1.00[ASN][1000 genomes]
rs17576709	1.00[ASN][1000 genomes]
rs17576779	1.00[ASN][1000 genomes]
rs17576842	1.00[ASN][1000 genomes]
rs17576870	1.00[ASN][1000 genomes]
rs17576954	1.00[ASN][1000 genomes]
rs17576989	1.00[ASN][1000 genomes]
rs17577024	1.00[ASN][1000 genomes]
rs17577052	1.00[ASN][1000 genomes]
rs17577159	1.00[ASN][1000 genomes]
rs17577313	1.00[ASN][1000 genomes]
rs17577369	1.00[ASN][1000 genomes]
rs17577447	1.00[ASN][1000 genomes]
rs17577496	1.00[ASN][1000 genomes]
rs17577650	1.00[ASN][1000 genomes]
rs17577877	1.00[ASN][1000 genomes]
rs17577954	1.00[ASN][1000 genomes]
rs17577975	1.00[ASN][1000 genomes]
rs17659881	1.00[ASN][1000 genomes]
rs17659953	1.00[ASN][1000 genomes]
rs17660017	1.00[ASN][1000 genomes]
rs17660065	1.00[ASN][1000 genomes]
rs17660132	1.00[ASN][1000 genomes]
rs17660167	1.00[ASN][1000 genomes]
rs17660228	1.00[ASN][1000 genomes]
rs17660251	1.00[ASN][1000 genomes]
rs17660294	1.00[ASN][1000 genomes]
rs17660337	1.00[ASN][1000 genomes]
rs17660398	1.00[ASN][1000 genomes]
rs17660464	1.00[ASN][1000 genomes]
rs17660488	1.00[ASN][1000 genomes]
rs17660595	1.00[ASN][1000 genomes]
rs17660847	1.00[ASN][1000 genomes]
rs17660865	1.00[ASN][1000 genomes]
rs17660907	1.00[ASN][1000 genomes]
rs17660936	1.00[ASN][1000 genomes]
rs17661015	1.00[ASN][1000 genomes]
rs17661027	1.00[ASN][1000 genomes]
rs17661045	1.00[ASN][1000 genomes]
rs17661141	1.00[ASN][1000 genomes]
rs17661348	1.00[ASN][1000 genomes]
rs17661385	1.00[ASN][1000 genomes]
rs17661428	1.00[ASN][1000 genomes]
rs17664048	1.00[ASN][1000 genomes]
rs17665188	0.80[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs1819040	1.00[ASN][1000 genomes]
rs1918786	1.00[ASN][1000 genomes]
rs1918787	1.00[ASN][1000 genomes]
rs1918794	1.00[ASN][1000 genomes]
rs1966345	1.00[ASN][1000 genomes]
rs2066899	1.00[ASN][1000 genomes]
rs2097760	1.00[ASN][1000 genomes]
rs2141298	1.00[ASN][1000 genomes]
rs2243967	1.00[ASN][1000 genomes]
rs2261016	0.81[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs2262140	0.81[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs2262144	1.00[ASN][1000 genomes]
rs2264542	1.00[ASN][1000 genomes]
rs2316954	1.00[ASN][1000 genomes]
rs2316955	1.00[ASN][1000 genomes]
rs2316956	1.00[ASN][1000 genomes]
rs2429438	0.88[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2429442	0.81[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2458216	0.81[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs2458217	1.00[ASN][1000 genomes]
rs2458218	1.00[ASN][1000 genomes]
rs2463515	1.00[ASN][1000 genomes]
rs2469914	1.00[ASN][1000 genomes]
rs2469937	0.80[EUR][1000 genomes]
rs2469940	0.81[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2469941	0.81[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs2469943	0.81[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs2469944	0.81[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs2532229	1.00[ASN][1000 genomes]
rs2532233	1.00[ASN][1000 genomes]
rs2532239	1.00[ASN][1000 genomes]
rs2532244	1.00[ASN][1000 genomes]
rs2532276	1.00[ASN][1000 genomes]
rs2532277	1.00[ASN][1000 genomes]
rs2532307	1.00[ASN][1000 genomes]
rs2532329	0.88[AMR][1000 genomes];0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2532330	0.88[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2532331	0.85[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2532336	0.81[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2532339	1.00[ASN][1000 genomes]
rs2532340	0.89[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2532343	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2532349	0.91[AFR][1000 genomes];0.88[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2532363	1.00[ASN][1000 genomes]
rs2532411	1.00[ASN][1000 genomes]
rs2532412	1.00[ASN][1000 genomes]
rs2532414	1.00[ASN][1000 genomes]
rs2532416	1.00[ASN][1000 genomes]
rs2532417	1.00[ASN][1000 genomes]
rs2532418	1.00[ASN][1000 genomes]
rs2532419	1.00[ASN][1000 genomes]
rs2532423	1.00[ASN][1000 genomes]
rs2668611	0.81[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs2668614	1.00[ASN][1000 genomes]
rs2668622	0.81[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2668626	1.00[ASN][1000 genomes]
rs2668627	0.86[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2668645	1.00[ASN][1000 genomes]
rs2668653	1.00[ASN][1000 genomes]
rs2668658	1.00[ASN][1000 genomes]
rs2668662	1.00[ASN][1000 genomes]
rs2668665	1.00[ASN][1000 genomes]
rs2668668	1.00[ASN][1000 genomes]
rs2668670	1.00[ASN][1000 genomes]
rs2668687	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2668691	1.00[ASN][1000 genomes]
rs2668692	1.00[ASN][1000 genomes]
rs2668694	1.00[ASN][1000 genomes]
rs2668695	1.00[ASN][1000 genomes]
rs2668713	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2668719	0.81[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs2668723	0.81[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs2696429	1.00[ASN][1000 genomes]
rs2696430	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2696445	1.00[ASN][1000 genomes]
rs2696515	1.00[ASN][1000 genomes]
rs2696516	1.00[ASN][1000 genomes]
rs2696517	1.00[ASN][1000 genomes]
rs2696518	1.00[ASN][1000 genomes]
rs2696522	0.86[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2696524	1.00[ASN][1000 genomes]
rs2696525	0.81[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2696527	0.81[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2696528	1.00[ASN][1000 genomes]
rs2696530	0.86[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2696531	1.00[ASN][1000 genomes]
rs2696532	0.84[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2696533	0.84[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2696534	0.84[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2696535	1.00[ASN][1000 genomes]
rs2696542	0.85[AMR][1000 genomes]
rs2696547	1.00[ASN][1000 genomes]
rs2696551	0.83[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2696555	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2696559	0.89[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2696560	0.81[AMR][1000 genomes];0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2696561	0.83[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2696565	1.00[ASN][1000 genomes]
rs2696566	1.00[ASN][1000 genomes]
rs2696568	1.00[ASN][1000 genomes]
rs2696569	1.00[ASN][1000 genomes]
rs2696608	1.00[ASN][1000 genomes]
rs2696609	1.00[ASN][1000 genomes]
rs2696610	1.00[ASN][1000 genomes]
rs2696617	1.00[ASN][1000 genomes]
rs2696633	1.00[ASN][1000 genomes]
rs2696635	1.00[ASN][1000 genomes]
rs2696673	1.00[ASN][1000 genomes]
rs2732601	1.00[ASN][1000 genomes]
rs2732613	1.00[ASN][1000 genomes]
rs2732619	1.00[ASN][1000 genomes]
rs2732625	1.00[ASN][1000 genomes]
rs2732628	1.00[ASN][1000 genomes]
rs2732629	1.00[ASN][1000 genomes]
rs2732631	1.00[ASN][1000 genomes]
rs2732649	0.89[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2732650	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs2732651	0.81[AFR][1000 genomes]
rs2732652	0.81[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs2732654	0.81[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs2732655	0.81[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs2732682	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2732683	0.90[AFR][1000 genomes];0.81[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2732685	0.85[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2732703	1.00[ASN][1000 genomes]
rs2732704	1.00[ASN][1000 genomes]
rs2732705	0.88[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2732706	0.89[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2732707	0.81[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2732708	0.89[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2732710	1.00[ASN][1000 genomes]
rs2732711	0.83[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2732712	0.88[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2732713	0.89[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2732715	1.00[ASN][1000 genomes]
rs2942160	0.90[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2942175	0.81[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs2942176	0.81[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs2942177	0.81[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs2942178	1.00[ASN][1000 genomes]
rs2950691	1.00[ASN][1000 genomes]
rs2950692	0.81[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs2950693	0.81[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs2950694	0.81[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs2950706	1.00[ASN][1000 genomes]
rs2957296	1.00[ASN][1000 genomes]
rs2957297	1.00[ASN][1000 genomes]
rs3087534	1.00[ASN][1000 genomes]
rs3108506	1.00[ASN][1000 genomes]
rs3110331	1.00[ASN][1000 genomes]
rs3110333	1.00[ASN][1000 genomes]
rs34046424	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35524223	1.00[ASN][1000 genomes]
rs36036607	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs36050210	0.89[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs36123991	1.00[ASN][1000 genomes]
rs3865315	1.00[ASN][1000 genomes]
rs3912060	1.00[ASN][1000 genomes]
rs3912061	1.00[ASN][1000 genomes]
rs3912062	1.00[ASN][1000 genomes]
rs3912063	1.00[ASN][1000 genomes]
rs4383188	1.00[ASN][1000 genomes]
rs4471723	1.00[ASN][1000 genomes]
rs4548919	1.00[ASN][1000 genomes]
rs4581739	1.00[ASN][1000 genomes]
rs4630591	1.00[ASN][1000 genomes]
rs55648323	1.00[ASN][1000 genomes]
rs55653937	1.00[ASN][1000 genomes]
rs55669501	1.00[ASN][1000 genomes]
rs55672516	1.00[ASN][1000 genomes]
rs55686102	1.00[ASN][1000 genomes]
rs55692232	1.00[ASN][1000 genomes]
rs55744103	1.00[ASN][1000 genomes]
rs55780786	1.00[ASN][1000 genomes]
rs55790833	1.00[ASN][1000 genomes]
rs55794067	1.00[ASN][1000 genomes]
rs55802590	1.00[ASN][1000 genomes]
rs55825513	1.00[ASN][1000 genomes]
rs55864131	1.00[ASN][1000 genomes]
rs55885063	1.00[ASN][1000 genomes]
rs55900347	1.00[ASN][1000 genomes]
rs55909047	1.00[ASN][1000 genomes]
rs55955207	1.00[ASN][1000 genomes]
rs55972730	1.00[ASN][1000 genomes]
rs55987700	1.00[ASN][1000 genomes]
rs56078347	1.00[ASN][1000 genomes]
rs56100031	1.00[ASN][1000 genomes]
rs56119705	1.00[ASN][1000 genomes]
rs56240678	1.00[ASN][1000 genomes]
rs56257094	1.00[ASN][1000 genomes]
rs56273589	1.00[ASN][1000 genomes]
rs62060812	1.00[ASN][1000 genomes]
rs62060834	1.00[ASN][1000 genomes]
rs62060835	1.00[ASN][1000 genomes]
rs62060836	1.00[ASN][1000 genomes]
rs62060837	1.00[ASN][1000 genomes]
rs62060838	1.00[ASN][1000 genomes]
rs62060839	1.00[ASN][1000 genomes]
rs62060840	1.00[ASN][1000 genomes]
rs62060841	1.00[ASN][1000 genomes]
rs62060842	1.00[ASN][1000 genomes]
rs62060843	1.00[ASN][1000 genomes]
rs62060844	1.00[ASN][1000 genomes]
rs62060845	1.00[ASN][1000 genomes]
rs62060846	1.00[ASN][1000 genomes]
rs62060847	1.00[ASN][1000 genomes]
rs62060850	1.00[ASN][1000 genomes]
rs62060851	1.00[ASN][1000 genomes]
rs62060852	1.00[ASN][1000 genomes]
rs62060853	1.00[ASN][1000 genomes]
rs62060856	1.00[ASN][1000 genomes]
rs62060858	1.00[ASN][1000 genomes]
rs62060859	1.00[ASN][1000 genomes]
rs62060946	1.00[ASN][1000 genomes]
rs62060947	1.00[ASN][1000 genomes]
rs62060952	1.00[ASN][1000 genomes]
rs62061764	1.00[ASN][1000 genomes]
rs62061766	1.00[ASN][1000 genomes]
rs62061767	1.00[ASN][1000 genomes]
rs62061770	1.00[ASN][1000 genomes]
rs62061771	1.00[ASN][1000 genomes]
rs62061772	1.00[ASN][1000 genomes]
rs62061788	1.00[ASN][1000 genomes]
rs62061789	1.00[ASN][1000 genomes]
rs62061790	1.00[ASN][1000 genomes]
rs62061791	1.00[ASN][1000 genomes]
rs62061792	1.00[ASN][1000 genomes]
rs62061793	1.00[ASN][1000 genomes]
rs62061795	1.00[ASN][1000 genomes]
rs62061796	1.00[ASN][1000 genomes]
rs62061798	1.00[ASN][1000 genomes]
rs62061800	1.00[ASN][1000 genomes]
rs62061801	1.00[ASN][1000 genomes]
rs62061802	1.00[ASN][1000 genomes]
rs62061803	1.00[ASN][1000 genomes]
rs62061807	1.00[ASN][1000 genomes]
rs62061808	1.00[ASN][1000 genomes]
rs62061809	1.00[ASN][1000 genomes]
rs62061810	1.00[ASN][1000 genomes]
rs62061811	1.00[ASN][1000 genomes]
rs62061812	1.00[ASN][1000 genomes]
rs62061814	1.00[ASN][1000 genomes]
rs62061815	1.00[ASN][1000 genomes]
rs62061816	1.00[ASN][1000 genomes]
rs62061817	1.00[ASN][1000 genomes]
rs62061818	1.00[ASN][1000 genomes]
rs62061820	1.00[ASN][1000 genomes]
rs62061821	1.00[ASN][1000 genomes]
rs62061822	1.00[ASN][1000 genomes]
rs62061823	1.00[ASN][1000 genomes]
rs62061824	1.00[ASN][1000 genomes]
rs62061845	1.00[ASN][1000 genomes]
rs62061847	1.00[ASN][1000 genomes]
rs62061848	1.00[ASN][1000 genomes]
rs62061849	1.00[ASN][1000 genomes]
rs62061850	1.00[ASN][1000 genomes]
rs62061851	1.00[ASN][1000 genomes]
rs62061852	1.00[ASN][1000 genomes]
rs62061853	1.00[ASN][1000 genomes]
rs62061854	1.00[ASN][1000 genomes]
rs62061855	1.00[ASN][1000 genomes]
rs62061856	1.00[ASN][1000 genomes]
rs62061858	1.00[ASN][1000 genomes]
rs62061859	1.00[ASN][1000 genomes]
rs62063163	1.00[ASN][1000 genomes]
rs62063164	1.00[ASN][1000 genomes]
rs62063165	1.00[ASN][1000 genomes]
rs62063166	1.00[ASN][1000 genomes]
rs62063171	1.00[ASN][1000 genomes]
rs62063172	1.00[ASN][1000 genomes]
rs62063174	1.00[ASN][1000 genomes]
rs62063200	1.00[ASN][1000 genomes]
rs62063201	1.00[ASN][1000 genomes]
rs62063202	1.00[ASN][1000 genomes]
rs62063203	1.00[ASN][1000 genomes]
rs62063207	1.00[ASN][1000 genomes]
rs62063208	1.00[ASN][1000 genomes]
rs62063212	1.00[ASN][1000 genomes]
rs62063234	1.00[ASN][1000 genomes]
rs62070911	1.00[ASN][1000 genomes]
rs62070948	1.00[ASN][1000 genomes]
rs62071576	0.81[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs62071596	1.00[ASN][1000 genomes]
rs62071621	1.00[ASN][1000 genomes]
rs62071631	1.00[ASN][1000 genomes]
rs62071640	1.00[ASN][1000 genomes]
rs62073099	1.00[ASN][1000 genomes]
rs62073152	1.00[ASN][1000 genomes]
rs62073155	1.00[ASN][1000 genomes]
rs62073156	0.82[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs62074562	0.82[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs6503457	1.00[ASN][1000 genomes]
rs7207582	1.00[ASN][1000 genomes]
rs727425	1.00[ASN][1000 genomes]
rs73984689	1.00[ASN][1000 genomes]
rs7502848	1.00[ASN][1000 genomes]
rs8070942	1.00[ASN][1000 genomes]
rs8080583	1.00[ASN][1000 genomes]
rs9303525	1.00[ASN][1000 genomes]
rs974291	1.00[ASN][1000 genomes]
rs974292	1.00[ASN][1000 genomes]
rs974293	1.00[ASN][1000 genomes]
rs974294	1.00[ASN][1000 genomes]
rs974295	1.00[ASN][1000 genomes]
rs9907738	1.00[ASN][1000 genomes]
rs9915547	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:851 , 50 per page) page: 1 2 3 4 5 6 7 ... 18

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv817315	chr17:43651731-44351152	Enhancers ZNF genes & repeats Bivalent Enhancer Weak transcription Flanking Active TSS Genic enhancers Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	52 gene(s)	inside rSNPs	diseases
2	nsv529777	chr17:43653227-44351644	Weak transcription Enhancers Genic enhancers Bivalent Enhancer Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	52 gene(s)	inside rSNPs	diseases
3	nsv1067695	chr17:43655747-44351152	Weak transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	52 gene(s)	inside rSNPs	diseases
4	nsv529378	chr17:43655747-44351152	Enhancers Active TSS Strong transcription Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	52 gene(s)	inside rSNPs	diseases
5	nsv529778	chr17:43675408-44351152	Weak transcription Genic enhancers Enhancers Flanking Active TSS Bivalent Enhancer Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	48 gene(s)	inside rSNPs	diseases
6	nsv529780	chr17:43706686-44485971	Active TSS Strong transcription Enhancers Weak transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	49 gene(s)	inside rSNPs	diseases
7	nsv817460	chr17:43706886-44351152	Flanking Active TSS Bivalent Enhancer Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
8	nsv529278	chr17:43706886-44694283	Active TSS Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	55 gene(s)	inside rSNPs	diseases
9	nsv534157	chr17:43717703-44345038	Enhancers Strong transcription Active TSS Bivalent Enhancer Weak transcription Genic enhancers Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
10	nsv529794	chr17:43717703-44351152	Weak transcription Strong transcription Bivalent/Poised TSS Active TSS Enhancers Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
11	nsv948604	chr17:43741452-44364056	Strong transcription Flanking Active TSS Weak transcription Enhancers Bivalent/Poised TSS Active TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
12	nsv529795	chr17:43751674-44351152	Flanking Active TSS Strong transcription Enhancers Weak transcription Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
13	nsv949112	chr17:43763241-44364056	Weak transcription Transcr. at gene 5' and 3' Strong transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
14	nsv431716	chr17:43893020-44868187	Strong transcription Weak transcription Enhancers Active TSS Flanking Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	62 gene(s)	inside rSNPs	diseases
15	esv2751685	chr17:44004972-44789317	Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer Genic enhancers Strong transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	47 gene(s)	inside rSNPs	diseases
16	esv2751686	chr17:44039564-44364056	Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Strong transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
17	nsv431717	chr17:44075901-44809001	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
18	nsv471698	chr17:44079479-44378253	Strong transcription Weak transcription Enhancers Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
19	nsv431718	chr17:44094463-44873614	Weak transcription Strong transcription Transcr. at gene 5' and 3' Enhancers Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	55 gene(s)	inside rSNPs	diseases
20	esv2751687	chr17:44094471-44364056	Enhancers Strong transcription Active TSS Weak transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
21	nsv575144	chr17:44109474-44354796	Enhancers Strong transcription Active TSS Flanking Bivalent TSS/Enh Weak transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
22	nsv516807	chr17:44109474-44793283	Active TSS Weak transcription Strong transcription Flanking Active TSS Enhancers Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
23	nsv431719	chr17:44111853-44364056	Weak transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Strong transcription Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
24	esv2751688	chr17:44115107-44364056	Strong transcription Enhancers Genic enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
25	nsv431720	chr17:44115107-44364056	Strong transcription Weak transcription Active TSS Enhancers Genic enhancers Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
26	nsv1063349	chr17:44116860-44435442	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	36 gene(s)	inside rSNPs	diseases
27	esv2753137	chr17:44116950-44353885	Genic enhancers Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
28	nsv431723	chr17:44118999-44364056	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
29	nsv575149	chr17:44131305-44350090	Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
30	nsv575150	chr17:44131305-44354796	Weak transcription Active TSS Enhancers Flanking Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
31	nsv543359	chr17:44132076-44792529	Weak transcription Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Strong transcription Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
32	nsv431726	chr17:44135864-44364056	Weak transcription Flanking Active TSS Enhancers Strong transcription Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
33	esv1792966	chr17:44136000-44422977	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
34	nsv529718	chr17:44138513-44694283	Weak transcription Flanking Active TSS Enhancers Strong transcription ZNF genes & repeats Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
35	nsv916230	chr17:44138515-44694311	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
36	esv2751689	chr17:44139662-44364056	Weak transcription Enhancers Genic enhancers Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
37	esv2751690	chr17:44139662-44364056	Weak transcription Flanking Active TSS Enhancers Strong transcription Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
38	esv2751691	chr17:44139662-44795190	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	44 gene(s)	inside rSNPs	diseases
39	esv2751692	chr17:44139662-44811116	Weak transcription Enhancers Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	44 gene(s)	inside rSNPs	diseases
40	esv2751693	chr17:44139682-44364056	Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
41	esv2751694	chr17:44139682-44789285	Enhancers Genic enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
42	esv2751695	chr17:44139682-44801340	Enhancers Active TSS Weak transcription Strong transcription Bivalent Enhancer Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	44 gene(s)	inside rSNPs	diseases
43	nsv470589	chr17:44140748-44350089	Enhancers Weak transcription Genic enhancers Strong transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
44	nsv575152	chr17:44140748-44350090	Flanking Active TSS Active TSS Bivalent/Poised TSS Enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
45	nsv908312	chr17:44140748-44354796	Weak transcription Enhancers Strong transcription Active TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
46	nsv908313	chr17:44140748-44368215	Weak transcription Strong transcription Active TSS Enhancers Genic enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	34 gene(s)	inside rSNPs	diseases
47	nsv908314	chr17:44140748-44375017	Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	34 gene(s)	inside rSNPs	diseases
48	nsv908315	chr17:44140748-44788310	Weak transcription Bivalent/Poised TSS Enhancers Strong transcription Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
49	nsv543362	chr17:44141175-44792529	Weak transcription Active TSS Enhancers Flanking Active TSS Genic enhancers Strong transcription ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
50	nsv431728	chr17:44144214-44353885	Enhancers ZNF genes & repeats Strong transcription Active TSS Weak transcription Genic enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases

mRNA abundance (count:127)

SNP	Gene	Cis/trans	Tissue	Source
rs2429440	RP11-259G18.3	cis	Nerve Tibial	GTEx
rs2429440	RP11-259G18.3	cis	Esophagus Muscularis	GTEx
rs2429440	LRRC37A4P	cis	Skin Sun Exposed Lower leg	GTEx
rs2429440	DND1P1	cis	Thyroid	GTEx
rs2429440	CRHR1-IT1	cis	Stomach	GTEx
rs2429440	LRRC37A2	cis	Artery Aorta	GTEx
rs2429440	CRHR1-IT1	cis	Thyroid	GTEx
rs2429440	CRHR1-IT1	cis	Muscle Skeletal	GTEx
rs2429440	RP11-259G18.2	cis	Stomach	GTEx
rs2429440	RP11-259G18.3	cis	Artery Aorta	GTEx
rs2429440	KANSL1-AS1	cis	Stomach	GTEx
rs2429440	LRRC37A2	cis	lung	GTEx
rs2429440	RP11-259G18.3	cis	Esophagus Mucosa	GTEx
rs2429440	RP11-259G18.2	cis	lung	GTEx
rs2429440	KANSL1-AS1	cis	Thyroid	GTEx
rs2429440	ARL17	Cis_1M	lymphoblastoid	RTeQTL
rs2429440	RP11-707O23.5	cis	Skin Sun Exposed Lower leg	GTEx
rs2429440	LRRC37A3	Cis_chr	lymphoblastoid	RTeQTL
rs2429440	LRRC37A4P	cis	Stomach	GTEx
rs2429440	LRRC37A2	cis	Stomach	GTEx
rs2429440	RP11-259G18.3	cis	Artery Tibial	GTEx
rs2429440	LRRC37A2	cis	Adipose Subcutaneous	GTEx
rs2429440	RP11-259G18.3	cis	Adipose Subcutaneous	GTEx
rs2429440	LRRC37A4P	cis	Heart Left Ventricle	GTEx
rs2429440	LRRC37A2	cis	Thyroid	GTEx
rs2429440	MAPT	cis	Esophagus Mucosa	GTEx
rs2429440	KANSL1-AS1	cis	Nerve Tibial	GTEx
rs2429440	DND1P1	cis	Adipose Subcutaneous	GTEx
rs2429440	KANSL1-AS1	cis	Muscle Skeletal	GTEx
rs2429440	CRHR1-IT1	cis	Whole Blood	GTEx
rs2429440	DND1P1	cis	Esophagus Mucosa	GTEx
rs2429440	LRRC37A2	cis	Nerve Tibial	GTEx
rs2429440	LRRC37A	cis	Muscle Skeletal	GTEx
rs2429440	WNT3	cis	Thyroid	GTEx
rs2429440	KANSL1-AS1	cis	lung	GTEx
rs2429440	RP11-259G18.3	cis	Thyroid	GTEx
rs2429440	LRRC37A4P	cis	Adipose Subcutaneous	GTEx
rs2429440	LRRC37A	cis	Thyroid	GTEx
rs2429440	LRRC37A4	Cis_1M	lymphoblastoid	RTeQTL
rs2429440	RP11-259G18.3	cis	Heart Left Ventricle	GTEx
rs2429440	LRRC37A4P	cis	Artery Aorta	GTEx
rs2429440	LRRC37A4P	cis	Artery Tibial	GTEx
rs2429440	LRRC37A	cis	Esophagus Muscularis	GTEx
rs2429440	RP11-259G18.2	cis	Thyroid	GTEx
rs2429440	LRRC37A	cis	Adipose Subcutaneous	GTEx
rs2429440	RP11-707O23.5	cis	lung	GTEx
rs2429440	RP11-707O23.5	cis	Nerve Tibial	GTEx
rs2429440	LRRC37A	cis	Stomach	GTEx
rs2429440	LRRC37A4P	cis	Whole Blood	GTEx
rs2429440	KANSL1-AS1	cis	Artery Aorta	GTEx
rs2429440	RP11-259G18.3	cis	Muscle Skeletal	GTEx
rs2429440	LRRC37A	cis	Artery Tibial	GTEx
rs2429440	LRRC37A2	cis	Heart Left Ventricle	GTEx
rs2429440	KANSL1-AS1	cis	Skin Sun Exposed Lower leg	GTEx
rs2429440	RP11-259G18.2	cis	Muscle Skeletal	GTEx
rs2429440	CRHR1-IT1	cis	Nerve Tibial	GTEx
rs2429440	MAPK8IP1	trans	lymphoblastoid	RTeQTL
rs2429440	RP11-707O23.5	cis	Heart Left Ventricle	GTEx
rs2429440	RP11-259G18.2	cis	Whole Blood	GTEx
rs2429440	LRRC37A4P	cis	Thyroid	GTEx
rs2429440	RP11-707O23.5	cis	Thyroid	GTEx
rs2429440	LRRC37A2	cis	Whole Blood	GTEx
rs2429440	LRRC37A	cis	Nerve Tibial	GTEx
rs2429440	CRHR1-IT1	cis	Esophagus Muscularis	GTEx
rs2429440	LRRC37A	cis	Skin Sun Exposed Lower leg	GTEx
rs2429440	DND1P1	cis	Skin Sun Exposed Lower leg	GTEx
rs2429440	RP11-259G18.3	cis	lung	GTEx
rs2429440	KANSL1-AS1	cis	Esophagus Mucosa	GTEx
rs2429440	CRHR1-IT1	cis	lung	GTEx
rs2429440	RP11-259G18.2	cis	Artery Aorta	GTEx
rs2429440	CRHR1	cis	Artery Aorta	GTEx
rs2429440	DND1P1	cis	Nerve Tibial	GTEx
rs2429440	ARHGAP27	Cis_1M	lymphoblastoid	RTeQTL
rs2429440	RP11-259G18.3	cis	Stomach	GTEx
rs2429440	CRHR1-IT1	cis	Artery Aorta	GTEx
rs2429440	LRRC37A2	cis	Artery Tibial	GTEx
rs2429440	RP11-259G18.2	cis	Esophagus Mucosa	GTEx
rs2429440	LRRC37A4P	cis	Muscle Skeletal	GTEx
rs2429440	LRRC37A4P	cis	lung	GTEx
rs2429440	LRRC37A4	cis	multi-tissue	Pritchard
rs2429440	CRHR1-IT1	cis	Heart Left Ventricle	GTEx
rs2429440	CRHR1	cis	Muscle Skeletal	GTEx
rs2429440	LRRC37A4P	cis	Esophagus Muscularis	GTEx
rs2429440	CRHR1	cis	Artery Tibial	GTEx
rs2429440	RP11-259G18.3	cis	Whole Blood	GTEx
rs2429440	LRRC37A17P	cis	Esophagus Mucosa	GTEx
rs2429440	DND1P1	cis	Whole Blood	GTEx
rs2429440	CRHR1	cis	Skin Sun Exposed Lower leg	GTEx
rs2429440	KANSL1-AS1	cis	Artery Tibial	GTEx
rs2429440	RP11-707O23.5	cis	Whole Blood	GTEx
rs2429440	RP11-259G18.2	cis	Esophagus Muscularis	GTEx
rs2429440	CRHR1-IT1	cis	Artery Tibial	GTEx
rs2429440	RP11-259G18.2	cis	Artery Tibial	GTEx
rs2429440	KANSL1-AS1	cis	Whole Blood	GTEx
rs2429440	DND1P1	cis	Artery Tibial	GTEx
rs2429440	LRRC37A	cis	Artery Aorta	GTEx
rs2429440	KANSL1-AS1	cis	Adipose Subcutaneous	GTEx
rs2429440	RP11-259G18.3	cis	Skin Sun Exposed Lower leg	GTEx
rs2429440	LRRC37A2	cis	Muscle Skeletal	GTEx
rs2429440	DND1P1	cis	lung	GTEx
rs2429440	DND1P1	cis	Artery Aorta	GTEx
rs2429440	CRHR1-IT1	cis	Skin Sun Exposed Lower leg	GTEx
rs2429440	LRRC37A4P	cis	Nerve Tibial	GTEx
rs2429440	KANSL1-AS1	cis	Esophagus Muscularis	GTEx
rs2429440	CRHR1-IT1	cis	Esophagus Mucosa	GTEx
rs2429440	RP11-707O23.5	cis	Adipose Subcutaneous	GTEx
rs2429440	LRRC37A2	cis	Esophagus Mucosa	GTEx
rs2429440	RP11-259G18.2	cis	Nerve Tibial	GTEx
rs2429440	RP11-259G18.2	cis	Adipose Subcutaneous	GTEx
rs2429440	LRRC37A2	cis	Skin Sun Exposed Lower leg	GTEx
rs2429440	CRHR1	cis	lung	GTEx
rs2429440	LRRC37A	cis	Esophagus Mucosa	GTEx
rs2429440	CRHR1	cis	Nerve Tibial	GTEx
rs2429440	CRHR1	cis	Adipose Subcutaneous	GTEx
rs2429440	CRHR1	cis	Esophagus Muscularis	GTEx
rs2429440	LRRC37A	cis	lung	GTEx
rs2429440	RP11-707O23.5	cis	Artery Tibial	GTEx
rs2429440	LOC644246	Cis_1M	lymphoblastoid	RTeQTL
rs2429440	CRHR1-IT1	cis	Adipose Subcutaneous	GTEx
rs2429440	RP11-259G18.2	cis	Skin Sun Exposed Lower leg	GTEx
rs2429440	LRRC37A2	cis	Esophagus Muscularis	GTEx
rs2429440	RP11-259G18.2	cis	Heart Left Ventricle	GTEx
rs2429440	BPTF	Cis_chr	lymphoblastoid	RTeQTL
rs2429440	KANSL1-AS1	cis	Heart Left Ventricle	GTEx
rs2429440	DND1P1	cis	Muscle Skeletal	GTEx
rs2429440	LRRC37A4P	cis	Esophagus Mucosa	GTEx
rs2429440	LRRC37A	cis	Whole Blood	GTEx

Chromatin state (count:74 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:44338000-44343000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr17:44338000-44343400	Weak transcription	Brain Angular Gyrus	brain
3	chr17:44338000-44343800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
4	chr17:44338200-44343200	Weak transcription	Adipose Nuclei	Adipose
5	chr17:44338200-44343200	Weak transcription	Brain Inferior Temporal Lobe	brain
6	chr17:44338200-44343200	Weak transcription	Duodenum Mucosa	Duodenum
7	chr17:44338200-44343600	Weak transcription	Liver	Liver
8	chr17:44338400-44343200	Weak transcription	Brain Anterior Caudate	brain
9	chr17:44338400-44343200	Weak transcription	Stomach Smooth Muscle	stomach
10	chr17:44338400-44343400	Weak transcription	Duodenum Smooth Muscle	Duodenum
11	chr17:44338400-44343600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
12	chr17:44338400-44343600	Weak transcription	Pancreas	Pancrea
13	chr17:44338400-44343800	Weak transcription	Sigmoid Colon	Sigmoid Colon
14	chr17:44340000-44343600	Weak transcription	Placenta Amnion	Placenta Amnion
15	chr17:44340200-44343600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
16	chr17:44340400-44343200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
17	chr17:44340400-44343800	Enhancers	Primary T cells fromperipheralblood	blood
18	chr17:44341000-44343600	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
19	chr17:44341200-44342800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
20	chr17:44341200-44343400	Enhancers	Primary T killer memory cells from peripheral blood	blood
21	chr17:44341200-44343600	Enhancers	HSMM	muscle
22	chr17:44341200-44343800	Enhancers	HMEC	breast
23	chr17:44341400-44342600	Enhancers	Primary T helper cells PMA-I stimulated	--
24	chr17:44341400-44342600	Enhancers	NH-A	brain
25	chr17:44341400-44342800	Enhancers	HSMMtube	muscle
26	chr17:44341400-44343200	Enhancers	HepG2	liver
27	chr17:44341400-44343400	Enhancers	Primary T cells from cord blood	blood
28	chr17:44341400-44343400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
29	chr17:44341400-44343400	Enhancers	Primary T helper cells fromperipheralblood	blood
30	chr17:44341400-44343400	Enhancers	Primary T killer naive cells fromperipheralblood	blood
31	chr17:44341400-44343600	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
32	chr17:44341600-44342600	Bivalent Enhancer	ES-I3 Cell Line	embryonic stem cell
33	chr17:44341600-44342600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
34	chr17:44341600-44342600	Flanking Active TSS	Hela-S3	cervix
35	chr17:44341600-44342800	Bivalent Enhancer	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
36	chr17:44341600-44342800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
37	chr17:44341600-44342800	Enhancers	Fetal Heart	heart
38	chr17:44341600-44343400	Enhancers	Primary T helper naive cells fromperipheralblood	blood
39	chr17:44341600-44343400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
40	chr17:44341600-44343400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
41	chr17:44341600-44343400	Enhancers	Rectal Mucosa Donor 29	rectum
42	chr17:44341600-44343400	Enhancers	Dnd41	blood
43	chr17:44341600-44343400	Enhancers	K562	blood
44	chr17:44341600-44343400	Enhancers	NHLF	lung
45	chr17:44341600-44343600	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
46	chr17:44341600-44343600	Enhancers	Muscle Satellite Cultured Cells	--
47	chr17:44341600-44343600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
48	chr17:44341600-44343600	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
49	chr17:44341600-44343600	Enhancers	A549	lung
50	chr17:44341800-44342600	Flanking Active TSS	NHEK	skin

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links