The 2.0 version of rSNPBase

Variant report

Variant rs12150319
Chromosome Location chr17:44213164-44213165
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:44180200-44214400 Weak transcription Hela-S3 cervix
2 chr17:44193000-44231400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
3 chr17:44193200-44232200 Enhancers Primary T helper cells fromperipheralblood blood
4 chr17:44194200-44248200 Enhancers Primary T killer naive cells fromperipheralblood blood
5 chr17:44194800-44214400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr17:44197000-44225200 Enhancers Primary T helper naive cells from peripheral blood blood
7 chr17:44200000-44215200 Weak transcription Placenta Amnion Placenta Amnion
8 chr17:44200400-44215200 Weak transcription Fetal Intestine Large intestine
9 chr17:44201400-44214400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr17:44201400-44216800 Weak transcription HUVEC blood vessel
11 chr17:44201400-44231200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
12 chr17:44202400-44223000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
13 chr17:44203200-44214000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
14 chr17:44203400-44215200 Weak transcription HMEC breast
15 chr17:44206000-44215800 Weak transcription Primary hematopoietic stem cells blood
16 chr17:44206200-44220000 Enhancers Primary T helper naive cells fromperipheralblood blood
17 chr17:44206400-44215400 Enhancers Primary T helper cells PMA-I stimulated --
18 chr17:44206400-44215400 Weak transcription Stomach Mucosa stomach
19 chr17:44206400-44216800 Weak transcription Aorta Aorta
20 chr17:44206400-44223000 Weak transcription Lung lung
21 chr17:44206400-44228600 Weak transcription Esophagus oesophagus
22 chr17:44207400-44228000 Weak transcription Fetal Brain Female brain
23 chr17:44208200-44215000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr17:44208200-44215200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
25 chr17:44208400-44213400 Weak transcription Fetal Adrenal Gland Adrenal Gland
26 chr17:44208400-44213600 Weak transcription Rectal Mucosa Donor 29 rectum
27 chr17:44208400-44213800 Weak transcription NHDF-Ad bronchial
28 chr17:44208400-44213800 Weak transcription NHLF lung
29 chr17:44208400-44215400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr17:44208400-44215800 Weak transcription Rectal Mucosa Donor 31 rectum
31 chr17:44208400-44216800 Weak transcription Fetal Lung lung
32 chr17:44208400-44216800 Weak transcription Osteobl bone
33 chr17:44208400-44221600 Weak transcription H9 Cell Line embryonic stem cell
34 chr17:44208600-44218800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr17:44208800-44213200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
36 chr17:44208800-44218200 Weak transcription Brain Germinal Matrix brain
37 chr17:44208800-44231200 Weak transcription Fetal Brain Male brain
38 chr17:44209000-44213400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr17:44209000-44213600 Weak transcription Pancreatic Islets Pancreatic Islet
40 chr17:44209000-44214000 Enhancers Primary T cells fromperipheralblood blood
41 chr17:44209000-44215200 Weak transcription Muscle Satellite Cultured Cells --
42 chr17:44209000-44231400 Weak transcription NH-A brain
43 chr17:44209200-44213200 Weak transcription Duodenum Mucosa Duodenum
44 chr17:44209200-44214000 Weak transcription A549 lung
45 chr17:44209200-44214200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr17:44209200-44216000 Weak transcription Sigmoid Colon Sigmoid Colon
47 chr17:44209200-44221400 Weak transcription HUES64 Cell Line embryonic stem cell
48 chr17:44209200-44221600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
49 chr17:44209400-44218600 Weak transcription Right Atrium heart
50 chr17:44209800-44215400 Weak transcription ES-I3 Cell Line embryonic stem cell

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Last update: Aug 31, 2015