The 2.0 version of rSNPBase

Variant report

Variant rs2950706
Chromosome Location chr17:44343004-44343005
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:44338000-44343400 Weak transcription Brain Angular Gyrus brain
2 chr17:44338000-44343800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
3 chr17:44338200-44343200 Weak transcription Adipose Nuclei Adipose
4 chr17:44338200-44343200 Weak transcription Brain Inferior Temporal Lobe brain
5 chr17:44338200-44343200 Weak transcription Duodenum Mucosa Duodenum
6 chr17:44338200-44343600 Weak transcription Liver Liver
7 chr17:44338400-44343200 Weak transcription Brain Anterior Caudate brain
8 chr17:44338400-44343200 Weak transcription Stomach Smooth Muscle stomach
9 chr17:44338400-44343400 Weak transcription Duodenum Smooth Muscle Duodenum
10 chr17:44338400-44343600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
11 chr17:44338400-44343600 Weak transcription Pancreas Pancrea
12 chr17:44338400-44343800 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr17:44340000-44343600 Weak transcription Placenta Amnion Placenta Amnion
14 chr17:44340200-44343600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
15 chr17:44340400-44343200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr17:44340400-44343800 Enhancers Primary T cells fromperipheralblood blood
17 chr17:44341000-44343600 Enhancers Primary Natural Killer cells fromperipheralblood blood
18 chr17:44341200-44343400 Enhancers Primary T killer memory cells from peripheral blood blood
19 chr17:44341200-44343600 Enhancers HSMM muscle
20 chr17:44341200-44343800 Enhancers HMEC breast
21 chr17:44341400-44343200 Enhancers HepG2 liver
22 chr17:44341400-44343400 Enhancers Primary T cells from cord blood blood
23 chr17:44341400-44343400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
24 chr17:44341400-44343400 Enhancers Primary T helper cells fromperipheralblood blood
25 chr17:44341400-44343400 Enhancers Primary T killer naive cells fromperipheralblood blood
26 chr17:44341400-44343600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
27 chr17:44341600-44343400 Enhancers Primary T helper naive cells fromperipheralblood blood
28 chr17:44341600-44343400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
29 chr17:44341600-44343400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
30 chr17:44341600-44343400 Enhancers Rectal Mucosa Donor 29 rectum
31 chr17:44341600-44343400 Enhancers Dnd41 blood
32 chr17:44341600-44343400 Enhancers K562 blood
33 chr17:44341600-44343400 Enhancers NHLF lung
34 chr17:44341600-44343600 Enhancers Primary T helper 17 cells PMA-I stimulated --
35 chr17:44341600-44343600 Enhancers Muscle Satellite Cultured Cells --
36 chr17:44341600-44343600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
37 chr17:44341600-44343600 Enhancers Primary mononuclear cells fromperipheralblood Blood
38 chr17:44341600-44343600 Enhancers A549 lung
39 chr17:44341800-44343200 Weak transcription Fetal Intestine Small intestine
40 chr17:44341800-44343400 Enhancers Primary T regulatory cells fromperipheralblood blood
41 chr17:44341800-44343600 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
42 chr17:44342200-44343200 Weak transcription Primary hematopoietic stem cells blood
43 chr17:44342200-44343200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
44 chr17:44342200-44343200 Enhancers Osteobl bone
45 chr17:44342200-44343600 Enhancers Primary T helper naive cells from peripheral blood blood
46 chr17:44342200-44343600 Weak transcription Colonic Mucosa Colon
47 chr17:44342200-44343600 Weak transcription HUVEC blood vessel
48 chr17:44342400-44343200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
49 chr17:44342400-44343200 Weak transcription Brain Substantia Nigra brain
50 chr17:44342400-44343400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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Last update: Aug 31, 2015