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Variant report

Variant rs2696430
Chromosome Location chr17:44338279-44338280
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:44323000-44341400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
2 chr17:44337000-44338400 Enhancers Primary T cells fromperipheralblood blood
3 chr17:44337200-44338400 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
4 chr17:44337200-44338400 Enhancers Primary monocytes fromperipheralblood blood
5 chr17:44337200-44338400 Enhancers Primary T helper cells PMA-I stimulated --
6 chr17:44337400-44338400 Active TSS Duodenum Smooth Muscle Duodenum
7 chr17:44337600-44341600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
8 chr17:44337800-44338400 ZNF genes & repeats H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr17:44337800-44341600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
10 chr17:44338000-44338400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
11 chr17:44338000-44338400 Enhancers Primary T helper 17 cells PMA-I stimulated --
12 chr17:44338000-44338400 Bivalent Enhancer Fetal Muscle Trunk muscle
13 chr17:44338000-44338400 Enhancers Pancreas Pancrea
14 chr17:44338000-44339200 Weak transcription HUVEC blood vessel
15 chr17:44338000-44339600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr17:44338000-44340000 Weak transcription A549 lung
17 chr17:44338000-44341200 Weak transcription Primary T killer memory cells from peripheral blood blood
18 chr17:44338000-44341200 Weak transcription HMEC breast
19 chr17:44338000-44341200 Weak transcription HSMM muscle
20 chr17:44338000-44341400 Weak transcription Primary T killer naive cells fromperipheralblood blood
21 chr17:44338000-44341400 Weak transcription HSMMtube muscle
22 chr17:44338000-44341600 Weak transcription Muscle Satellite Cultured Cells --
23 chr17:44338000-44341600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
24 chr17:44338000-44341600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
25 chr17:44338000-44341600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr17:44338000-44341600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr17:44338000-44341600 Weak transcription K562 blood
28 chr17:44338000-44341600 Weak transcription NHLF lung
29 chr17:44338000-44341800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
30 chr17:44338000-44341800 Weak transcription GM12878-XiMat blood
31 chr17:44338000-44342000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr17:44338000-44342000 Weak transcription Placenta Placenta
33 chr17:44338000-44342000 Weak transcription NHDF-Ad bronchial
34 chr17:44338000-44343000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
35 chr17:44338000-44343400 Weak transcription Brain Angular Gyrus brain
36 chr17:44338000-44343800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
37 chr17:44338200-44338400 Enhancers Primary Natural Killer cells fromperipheralblood blood
38 chr17:44338200-44338400 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr17:44338200-44338400 Flanking Active TSS Brain Anterior Caudate brain
40 chr17:44338200-44338400 Enhancers Colonic Mucosa Colon
41 chr17:44338200-44338400 Flanking Active TSS Colon Smooth Muscle Colon
42 chr17:44338200-44338400 Flanking Active TSS Rectal Smooth Muscle rectum
43 chr17:44338200-44338400 Enhancers Sigmoid Colon Sigmoid Colon
44 chr17:44338200-44338400 Active TSS Stomach Smooth Muscle stomach
45 chr17:44338200-44338600 Enhancers Rectal Mucosa Donor 29 rectum
46 chr17:44338200-44339400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
47 chr17:44338200-44340200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
48 chr17:44338200-44341400 Weak transcription Primary T helper cells fromperipheralblood blood
49 chr17:44338200-44341600 Weak transcription Primary T helper naive cells fromperipheralblood blood
50 chr17:44338200-44341800 Weak transcription Skeletal Muscle Male skeletal muscle

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Last update: Aug 31, 2015