Variant report

Variant rs2141298
Chromosome Location chr17:44268488-44268489
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:44258400-44268600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr17:44262800-44269000 Weak transcription Esophagus oesophagus
3 chr17:44264400-44268600 Weak transcription Fetal Muscle Trunk muscle
4 chr17:44264600-44268600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
5 chr17:44264800-44268600 Enhancers Fetal Adrenal Gland Adrenal Gland
6 chr17:44265400-44268600 Enhancers Primary neutrophils fromperipheralblood blood
7 chr17:44265600-44268600 Enhancers Sigmoid Colon Sigmoid Colon
8 chr17:44265600-44269000 Flanking Active TSS Primary T helper cells PMA-I stimulated --
9 chr17:44266200-44268600 Weak transcription Placenta Placenta
10 chr17:44266400-44269000 Flanking Active TSS Dnd41 blood
11 chr17:44266400-44269200 Flanking Active TSS Primary T cells from cord blood blood
12 chr17:44266600-44268600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
13 chr17:44266600-44268800 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
14 chr17:44266600-44269000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr17:44266600-44269200 Weak transcription Spleen Spleen
16 chr17:44267000-44268600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr17:44267000-44268800 Flanking Active TSS Rectal Mucosa Donor 29 rectum
18 chr17:44267200-44268600 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
19 chr17:44267200-44268600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
20 chr17:44267200-44268800 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr17:44267200-44268800 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
22 chr17:44267200-44268800 Flanking Active TSS Brain Inferior Temporal Lobe brain
23 chr17:44267200-44268800 Flanking Active TSS Colon Smooth Muscle Colon
24 chr17:44267200-44268800 Flanking Active TSS NHEK skin
25 chr17:44267200-44269000 Flanking Active TSS HUES64 Cell Line embryonic stem cell
26 chr17:44267200-44269000 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
27 chr17:44267200-44269000 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
28 chr17:44267200-44269000 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
29 chr17:44267200-44269000 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr17:44267200-44269000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr17:44267200-44269000 Weak transcription Pancreas Pancrea
32 chr17:44267200-44269600 Flanking Active TSS Primary B cells from cord blood blood
33 chr17:44267400-44268600 Flanking Active TSS Muscle Satellite Cultured Cells --
34 chr17:44267400-44268600 Flanking Active TSS Duodenum Smooth Muscle Duodenum
35 chr17:44267400-44268600 Enhancers Fetal Intestine Small intestine
36 chr17:44267400-44268600 Flanking Active TSS Pancreatic Islets Pancreatic Islet
37 chr17:44267400-44268600 Weak transcription Left Ventricle heart
38 chr17:44267400-44268800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
39 chr17:44267400-44268800 Flanking Active TSS Brain Anterior Caudate brain
40 chr17:44267400-44269000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr17:44267400-44269000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr17:44267400-44269000 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
43 chr17:44267400-44269000 Weak transcription Gastric stomach
44 chr17:44267400-44269000 Weak transcription Lung lung
45 chr17:44267400-44269000 Flanking Active TSS Hela-S3 cervix
46 chr17:44267400-44269800 Flanking Active TSS Primary T helper cells fromperipheralblood blood
47 chr17:44267400-44270400 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
48 chr17:44267400-44270400 Active TSS Right Atrium heart
49 chr17:44267400-44271600 Active TSS Stomach Smooth Muscle stomach
50 chr17:44267400-44271600 Active TSS HSMMtube muscle

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