Variant report
Variant | rs2696534 |
---|---|
Chromosome Location | chr17:44355162-44355163 |
allele | A/C/G/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10221243 | 1.00[ASN][1000 genomes] |
rs10514901 | 1.00[ASN][1000 genomes] |
rs10514903 | 1.00[ASN][1000 genomes] |
rs10514904 | 1.00[ASN][1000 genomes] |
rs11079733 | 1.00[ASN][1000 genomes] |
rs1122380 | 1.00[ASN][1000 genomes] |
rs1122381 | 1.00[ASN][1000 genomes] |
rs12150087 | 1.00[ASN][1000 genomes] |
rs12150319 | 1.00[ASN][1000 genomes] |
rs1358439 | 1.00[ASN][1000 genomes] |
rs1468240 | 1.00[ASN][1000 genomes] |
rs16940904 | 1.00[ASN][1000 genomes] |
rs1706725 | 1.00[ASN][1000 genomes] |
rs17576631 | 1.00[ASN][1000 genomes] |
rs17576695 | 1.00[ASN][1000 genomes] |
rs17576709 | 1.00[ASN][1000 genomes] |
rs17576779 | 1.00[ASN][1000 genomes] |
rs17576842 | 1.00[ASN][1000 genomes] |
rs17576870 | 1.00[ASN][1000 genomes] |
rs17576954 | 1.00[ASN][1000 genomes] |
rs17576989 | 1.00[ASN][1000 genomes] |
rs17577024 | 1.00[ASN][1000 genomes] |
rs17577052 | 1.00[ASN][1000 genomes] |
rs17577159 | 1.00[ASN][1000 genomes] |
rs17577313 | 1.00[ASN][1000 genomes] |
rs17577369 | 1.00[ASN][1000 genomes] |
rs17577447 | 1.00[ASN][1000 genomes] |
rs17577496 | 1.00[ASN][1000 genomes] |
rs17577650 | 1.00[ASN][1000 genomes] |
rs17577877 | 1.00[ASN][1000 genomes] |
rs17577954 | 1.00[ASN][1000 genomes] |
rs17577975 | 1.00[ASN][1000 genomes] |
rs17660167 | 1.00[ASN][1000 genomes] |
rs17660228 | 1.00[ASN][1000 genomes] |
rs17660251 | 1.00[ASN][1000 genomes] |
rs17660294 | 1.00[ASN][1000 genomes] |
rs17660337 | 1.00[ASN][1000 genomes] |
rs17660398 | 1.00[ASN][1000 genomes] |
rs17660464 | 1.00[ASN][1000 genomes] |
rs17660488 | 1.00[ASN][1000 genomes] |
rs17660595 | 1.00[ASN][1000 genomes] |
rs17660847 | 1.00[ASN][1000 genomes] |
rs17660865 | 1.00[ASN][1000 genomes] |
rs17660907 | 1.00[ASN][1000 genomes] |
rs17660936 | 1.00[ASN][1000 genomes] |
rs17661015 | 1.00[ASN][1000 genomes] |
rs17661027 | 1.00[ASN][1000 genomes] |
rs17661045 | 1.00[ASN][1000 genomes] |
rs17661141 | 1.00[ASN][1000 genomes] |
rs17661348 | 1.00[ASN][1000 genomes] |
rs17661385 | 1.00[ASN][1000 genomes] |
rs17661428 | 1.00[ASN][1000 genomes] |
rs17664048 | 1.00[ASN][1000 genomes] |
rs17665188 | 0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1819040 | 1.00[ASN][1000 genomes] |
rs1918786 | 1.00[ASN][1000 genomes] |
rs1918787 | 1.00[ASN][1000 genomes] |
rs1918794 | 1.00[ASN][1000 genomes] |
rs1966345 | 1.00[ASN][1000 genomes] |
rs2097760 | 1.00[ASN][1000 genomes] |
rs2141298 | 1.00[ASN][1000 genomes] |
rs2243967 | 1.00[ASN][1000 genomes] |
rs2261016 | 0.82[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs2262140 | 0.82[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs2262144 | 0.91[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs2264542 | 1.00[ASN][1000 genomes] |
rs2429438 | 0.82[AFR][1000 genomes];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2429440 | 0.84[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs2429442 | 1.00[ASN][1000 genomes] |
rs2458216 | 0.82[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs2458217 | 0.91[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs2458218 | 0.82[AFR][1000 genomes];0.80[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2463515 | 1.00[ASN][1000 genomes] |
rs2469914 | 1.00[ASN][1000 genomes] |
rs2469940 | 0.91[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs2469941 | 0.82[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs2469943 | 0.82[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs2469944 | 1.00[ASN][1000 genomes] |
rs2532229 | 1.00[ASN][1000 genomes] |
rs2532233 | 1.00[ASN][1000 genomes] |
rs2532239 | 1.00[ASN][1000 genomes] |
rs2532244 | 1.00[ASN][1000 genomes] |
rs2532276 | 1.00[ASN][1000 genomes] |
rs2532277 | 1.00[ASN][1000 genomes] |
rs2532307 | 1.00[ASN][1000 genomes] |
rs2532329 | 0.82[AFR][1000 genomes];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2532330 | 0.82[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2532331 | 0.81[AFR][1000 genomes];1.00[ASN][1000 genomes] |
rs2532336 | 0.81[AFR][1000 genomes];1.00[ASN][1000 genomes] |
rs2532339 | 0.81[AFR][1000 genomes];1.00[ASN][1000 genomes] |
rs2532340 | 0.82[AFR][1000 genomes];0.95[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2532343 | 0.82[AFR][1000 genomes];0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2532349 | 0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2532363 | 0.80[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs2532411 | 1.00[ASN][1000 genomes] |
rs2532412 | 1.00[ASN][1000 genomes] |
rs2532414 | 1.00[ASN][1000 genomes] |
rs2532416 | 1.00[ASN][1000 genomes] |
rs2532417 | 1.00[ASN][1000 genomes] |
rs2532418 | 1.00[ASN][1000 genomes] |
rs2532419 | 1.00[ASN][1000 genomes] |
rs2532423 | 1.00[ASN][1000 genomes] |
rs2668611 | 0.82[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs2668614 | 1.00[ASN][1000 genomes] |
rs2668622 | 0.84[AFR][1000 genomes];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2668626 | 0.91[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs2668627 | 0.91[AFR][1000 genomes];0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2668645 | 1.00[ASN][1000 genomes] |
rs2668653 | 1.00[ASN][1000 genomes] |
rs2668658 | 1.00[ASN][1000 genomes] |
rs2668662 | 1.00[ASN][1000 genomes] |
rs2668665 | 1.00[ASN][1000 genomes] |
rs2668668 | 1.00[ASN][1000 genomes] |
rs2668670 | 1.00[ASN][1000 genomes] |
rs2668687 | 0.82[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs2668691 | 1.00[ASN][1000 genomes] |
rs2668692 | 1.00[ASN][1000 genomes] |
rs2668694 | 1.00[ASN][1000 genomes] |
rs2668695 | 1.00[ASN][1000 genomes] |
rs2668713 | 0.84[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs2668719 | 0.82[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs2668723 | 1.00[ASN][1000 genomes] |
rs2696429 | 0.84[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs2696430 | 0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2696445 | 1.00[ASN][1000 genomes] |
rs2696515 | 0.91[AFR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2696516 | 0.91[AFR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2696517 | 1.00[AFR][1000 genomes];0.80[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs2696518 | 0.91[AFR][1000 genomes];0.86[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2696522 | 1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2696524 | 1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2696525 | 0.91[AFR][1000 genomes];0.91[AMR][1000 genomes];0.80[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2696527 | 0.91[AFR][1000 genomes];0.91[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2696528 | 0.84[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2696530 | 0.91[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2696531 | 0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2696532 | 1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2696533 | 1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2696535 | 1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2696542 | 0.91[AFR][1000 genomes];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes] |
rs2696547 | 0.91[AFR][1000 genomes];0.80[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs2696551 | 0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs2696555 | 0.82[AFR][1000 genomes];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2696559 | 0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2696560 | 0.91[AFR][1000 genomes];1.00[ASN][1000 genomes] |
rs2696561 | 0.91[AFR][1000 genomes];0.86[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs2696565 | 0.91[AFR][1000 genomes];1.00[ASN][1000 genomes] |
rs2696566 | 1.00[ASN][1000 genomes] |
rs2696568 | 1.00[ASN][1000 genomes] |
rs2696569 | 1.00[ASN][1000 genomes] |
rs2696608 | 1.00[ASN][1000 genomes] |
rs2696609 | 1.00[ASN][1000 genomes] |
rs2696610 | 1.00[ASN][1000 genomes] |
rs2696617 | 1.00[ASN][1000 genomes] |
rs2696633 | 1.00[ASN][1000 genomes] |
rs2696635 | 1.00[ASN][1000 genomes] |
rs2696673 | 1.00[ASN][1000 genomes] |
rs2732601 | 1.00[ASN][1000 genomes] |
rs2732613 | 0.82[AFR][1000 genomes];0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2732619 | 1.00[ASN][1000 genomes] |
rs2732625 | 0.82[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs2732628 | 1.00[ASN][1000 genomes] |
rs2732629 | 1.00[ASN][1000 genomes] |
rs2732631 | 1.00[ASN][1000 genomes] |
rs2732649 | 0.95[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2732650 | 0.82[AFR][1000 genomes];0.93[AMR][1000 genomes];0.90[EUR][1000 genomes] |
rs2732651 | 0.82[AMR][1000 genomes] |
rs2732652 | 0.82[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs2732654 | 0.80[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs2732655 | 1.00[ASN][1000 genomes] |
rs2732682 | 1.00[ASN][1000 genomes] |
rs2732683 | 1.00[ASN][1000 genomes] |
rs2732685 | 0.90[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2732703 | 0.91[AFR][1000 genomes];0.80[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs2732704 | 0.91[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs2732705 | 1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2732706 | 1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2732707 | 0.81[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs2732708 | 0.91[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2732710 | 0.91[AFR][1000 genomes];0.82[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2732711 | 0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs2732712 | 0.82[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2732713 | 0.82[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2732715 | 1.00[ASN][1000 genomes] |
rs2942160 | 1.00[ASN][1000 genomes] |
rs2942175 | 0.82[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs2942176 | 0.82[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs2942177 | 0.82[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs2942178 | 0.91[AFR][1000 genomes];0.86[AMR][1000 genomes];0.80[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2950691 | 1.00[ASN][1000 genomes] |
rs2950692 | 0.82[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs2950693 | 0.82[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs2950694 | 0.82[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs2950706 | 0.82[AFR][1000 genomes];1.00[ASN][1000 genomes] |
rs2957296 | 1.00[ASN][1000 genomes] |
rs2957297 | 1.00[ASN][1000 genomes] |
rs3087534 | 1.00[ASN][1000 genomes] |
rs3108506 | 1.00[ASN][1000 genomes] |
rs3110331 | 1.00[ASN][1000 genomes] |
rs3110333 | 1.00[ASN][1000 genomes] |
rs34046424 | 0.84[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs35524223 | 1.00[ASN][1000 genomes] |
rs36036607 | 1.00[ASN][1000 genomes] |
rs36050210 | 1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs36123991 | 1.00[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs4383188 | 1.00[ASN][1000 genomes] |
rs4471723 | 1.00[ASN][1000 genomes] |
rs4548919 | 1.00[ASN][1000 genomes] |
rs4581739 | 1.00[ASN][1000 genomes] |
rs4630591 | 1.00[ASN][1000 genomes] |
rs55648323 | 1.00[ASN][1000 genomes] |
rs55653937 | 1.00[ASN][1000 genomes] |
rs55669501 | 1.00[ASN][1000 genomes] |
rs55672516 | 1.00[ASN][1000 genomes] |
rs55686102 | 1.00[ASN][1000 genomes] |
rs55744103 | 1.00[ASN][1000 genomes] |
rs55780786 | 1.00[ASN][1000 genomes] |
rs55790833 | 1.00[ASN][1000 genomes] |
rs55794067 | 1.00[ASN][1000 genomes] |
rs55802590 | 1.00[ASN][1000 genomes] |
rs55825513 | 1.00[ASN][1000 genomes] |
rs55885063 | 1.00[ASN][1000 genomes] |
rs55900347 | 1.00[ASN][1000 genomes] |
rs55909047 | 1.00[ASN][1000 genomes] |
rs56078347 | 1.00[ASN][1000 genomes] |
rs56119705 | 1.00[ASN][1000 genomes] |
rs56240678 | 1.00[ASN][1000 genomes] |
rs56257094 | 1.00[ASN][1000 genomes] |
rs56273589 | 1.00[ASN][1000 genomes] |
rs62060946 | 1.00[ASN][1000 genomes] |
rs62060947 | 1.00[ASN][1000 genomes] |
rs62060952 | 1.00[ASN][1000 genomes] |
rs62061764 | 1.00[ASN][1000 genomes] |
rs62061766 | 1.00[ASN][1000 genomes] |
rs62061767 | 1.00[ASN][1000 genomes] |
rs62061770 | 1.00[ASN][1000 genomes] |
rs62061771 | 1.00[ASN][1000 genomes] |
rs62061772 | 1.00[ASN][1000 genomes] |
rs62061788 | 1.00[ASN][1000 genomes] |
rs62061789 | 1.00[ASN][1000 genomes] |
rs62061790 | 1.00[ASN][1000 genomes] |
rs62061791 | 1.00[ASN][1000 genomes] |
rs62061792 | 1.00[ASN][1000 genomes] |
rs62061793 | 1.00[ASN][1000 genomes] |
rs62061795 | 1.00[ASN][1000 genomes] |
rs62061796 | 1.00[ASN][1000 genomes] |
rs62061798 | 1.00[ASN][1000 genomes] |
rs62061800 | 1.00[ASN][1000 genomes] |
rs62061801 | 1.00[ASN][1000 genomes] |
rs62061802 | 1.00[ASN][1000 genomes] |
rs62061803 | 1.00[ASN][1000 genomes] |
rs62061807 | 1.00[ASN][1000 genomes] |
rs62061808 | 1.00[ASN][1000 genomes] |
rs62061809 | 1.00[ASN][1000 genomes] |
rs62061810 | 1.00[ASN][1000 genomes] |
rs62061811 | 1.00[ASN][1000 genomes] |
rs62061812 | 1.00[ASN][1000 genomes] |
rs62061814 | 1.00[ASN][1000 genomes] |
rs62061815 | 1.00[ASN][1000 genomes] |
rs62061816 | 1.00[ASN][1000 genomes] |
rs62061817 | 1.00[ASN][1000 genomes] |
rs62061818 | 1.00[ASN][1000 genomes] |
rs62061820 | 1.00[ASN][1000 genomes] |
rs62061821 | 1.00[ASN][1000 genomes] |
rs62061822 | 1.00[ASN][1000 genomes] |
rs62061823 | 1.00[ASN][1000 genomes] |
rs62061824 | 1.00[ASN][1000 genomes] |
rs62061845 | 1.00[ASN][1000 genomes] |
rs62061847 | 1.00[ASN][1000 genomes] |
rs62061848 | 1.00[ASN][1000 genomes] |
rs62061849 | 1.00[ASN][1000 genomes] |
rs62061850 | 1.00[ASN][1000 genomes] |
rs62061851 | 1.00[ASN][1000 genomes] |
rs62061852 | 1.00[ASN][1000 genomes] |
rs62061853 | 1.00[ASN][1000 genomes] |
rs62061854 | 1.00[ASN][1000 genomes] |
rs62061855 | 1.00[ASN][1000 genomes] |
rs62061856 | 1.00[ASN][1000 genomes] |
rs62061858 | 1.00[ASN][1000 genomes] |
rs62061859 | 1.00[ASN][1000 genomes] |
rs62063163 | 1.00[ASN][1000 genomes] |
rs62063164 | 1.00[ASN][1000 genomes] |
rs62063165 | 1.00[ASN][1000 genomes] |
rs62063166 | 1.00[ASN][1000 genomes] |
rs62063171 | 1.00[ASN][1000 genomes] |
rs62063172 | 1.00[ASN][1000 genomes] |
rs62063174 | 1.00[ASN][1000 genomes] |
rs62063200 | 1.00[ASN][1000 genomes] |
rs62063201 | 1.00[ASN][1000 genomes] |
rs62063202 | 1.00[ASN][1000 genomes] |
rs62063203 | 1.00[ASN][1000 genomes] |
rs62063207 | 1.00[ASN][1000 genomes] |
rs62063208 | 1.00[ASN][1000 genomes] |
rs62063212 | 1.00[ASN][1000 genomes] |
rs62063234 | 1.00[ASN][1000 genomes] |
rs62070911 | 1.00[ASN][1000 genomes] |
rs62070948 | 1.00[ASN][1000 genomes] |
rs62071576 | 0.82[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs62071596 | 1.00[ASN][1000 genomes] |
rs62071621 | 0.81[AFR][1000 genomes];0.80[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs62071631 | 0.91[AFR][1000 genomes];1.00[ASN][1000 genomes] |
rs62071640 | 1.00[ASN][1000 genomes] |
rs62073099 | 1.00[ASN][1000 genomes] |
rs62073152 | 1.00[ASN][1000 genomes] |
rs62073155 | 1.00[ASN][1000 genomes] |
rs62073156 | 0.88[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs62074562 | 0.88[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6503457 | 1.00[ASN][1000 genomes] |
rs7207582 | 1.00[ASN][1000 genomes] |
rs727425 | 1.00[ASN][1000 genomes] |
rs73984689 | 1.00[ASN][1000 genomes] |
rs7502848 | 1.00[ASN][1000 genomes] |
rs8070942 | 1.00[ASN][1000 genomes] |
rs9303525 | 1.00[ASN][1000 genomes] |
rs9915547 | 1.00[ASN][1000 genomes] |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv529780 | chr17:43706686-44485971 | Active TSS Strong transcription Enhancers Weak transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 49 gene(s) | inside rSNPs | diseases |
2 | nsv529278 | chr17:43706886-44694283 | Active TSS Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 55 gene(s) | inside rSNPs | diseases |
3 | nsv948604 | chr17:43741452-44364056 | Strong transcription Flanking Active TSS Weak transcription Enhancers Bivalent/Poised TSS Active TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 45 gene(s) | inside rSNPs | diseases |
4 | nsv949112 | chr17:43763241-44364056 | Weak transcription Transcr. at gene 5' and 3' Strong transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 45 gene(s) | inside rSNPs | diseases |
5 | nsv431716 | chr17:43893020-44868187 | Strong transcription Weak transcription Enhancers Active TSS Flanking Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 62 gene(s) | inside rSNPs | diseases |
6 | esv2751685 | chr17:44004972-44789317 | Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer Genic enhancers Strong transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 47 gene(s) | inside rSNPs | diseases |
7 | esv2751686 | chr17:44039564-44364056 | Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Strong transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 34 gene(s) | inside rSNPs | diseases |
8 | nsv431717 | chr17:44075901-44809001 | Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 45 gene(s) | inside rSNPs | diseases |
9 | nsv471698 | chr17:44079479-44378253 | Strong transcription Weak transcription Enhancers Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 35 gene(s) | inside rSNPs | diseases |
10 | nsv431718 | chr17:44094463-44873614 | Weak transcription Strong transcription Transcr. at gene 5' and 3' Enhancers Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS ZNF genes & repeats Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 55 gene(s) | inside rSNPs | diseases |
11 | esv2751687 | chr17:44094471-44364056 | Enhancers Strong transcription Active TSS Weak transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 33 gene(s) | inside rSNPs | diseases |
12 | nsv516807 | chr17:44109474-44793283 | Active TSS Weak transcription Strong transcription Flanking Active TSS Enhancers Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 43 gene(s) | inside rSNPs | diseases |
13 | nsv431719 | chr17:44111853-44364056 | Weak transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Strong transcription Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 33 gene(s) | inside rSNPs | diseases |
14 | esv2751688 | chr17:44115107-44364056 | Strong transcription Enhancers Genic enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 33 gene(s) | inside rSNPs | diseases |
15 | nsv431720 | chr17:44115107-44364056 | Strong transcription Weak transcription Active TSS Enhancers Genic enhancers Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 33 gene(s) | inside rSNPs | diseases |
16 | nsv1063349 | chr17:44116860-44435442 | Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 36 gene(s) | inside rSNPs | diseases |
17 | nsv431723 | chr17:44118999-44364056 | Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 33 gene(s) | inside rSNPs | diseases |
18 | nsv543359 | chr17:44132076-44792529 | Weak transcription Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Strong transcription Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 43 gene(s) | inside rSNPs | diseases |
19 | nsv431726 | chr17:44135864-44364056 | Weak transcription Flanking Active TSS Enhancers Strong transcription Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 33 gene(s) | inside rSNPs | diseases |
20 | esv1792966 | chr17:44136000-44422977 | Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 35 gene(s) | inside rSNPs | diseases |
21 | nsv529718 | chr17:44138513-44694283 | Weak transcription Flanking Active TSS Enhancers Strong transcription ZNF genes & repeats Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 43 gene(s) | inside rSNPs | diseases |
22 | nsv916230 | chr17:44138515-44694311 | Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 43 gene(s) | inside rSNPs | diseases |
23 | esv2751689 | chr17:44139662-44364056 | Weak transcription Enhancers Genic enhancers Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 33 gene(s) | inside rSNPs | diseases |
24 | esv2751690 | chr17:44139662-44364056 | Weak transcription Flanking Active TSS Enhancers Strong transcription Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 33 gene(s) | inside rSNPs | diseases |
25 | esv2751691 | chr17:44139662-44795190 | Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 44 gene(s) | inside rSNPs | diseases |
26 | esv2751692 | chr17:44139662-44811116 | Weak transcription Enhancers Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 44 gene(s) | inside rSNPs | diseases |
27 | esv2751693 | chr17:44139682-44364056 | Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 33 gene(s) | inside rSNPs | diseases |
28 | esv2751694 | chr17:44139682-44789285 | Enhancers Genic enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 43 gene(s) | inside rSNPs | diseases |
29 | esv2751695 | chr17:44139682-44801340 | Enhancers Active TSS Weak transcription Strong transcription Bivalent Enhancer Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 44 gene(s) | inside rSNPs | diseases |
30 | nsv908313 | chr17:44140748-44368215 | Weak transcription Strong transcription Active TSS Enhancers Genic enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 34 gene(s) | inside rSNPs | diseases |
31 | nsv908314 | chr17:44140748-44375017 | Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 34 gene(s) | inside rSNPs | diseases |
32 | nsv908315 | chr17:44140748-44788310 | Weak transcription Bivalent/Poised TSS Enhancers Strong transcription Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 43 gene(s) | inside rSNPs | diseases |
33 | nsv543362 | chr17:44141175-44792529 | Weak transcription Active TSS Enhancers Flanking Active TSS Genic enhancers Strong transcription ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 43 gene(s) | inside rSNPs | diseases |
34 | esv2751696 | chr17:44144214-44364056 | Flanking Active TSS Genic enhancers Enhancers Weak transcription Strong transcription Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 33 gene(s) | inside rSNPs | diseases |
35 | nsv431731 | chr17:44144214-44364056 | Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 33 gene(s) | inside rSNPs | diseases |
36 | esv2751697 | chr17:44144214-44796777 | Flanking Active TSS Strong transcription Weak transcription Enhancers Bivalent/Poised TSS Genic enhancers Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 44 gene(s) | inside rSNPs | diseases |
37 | nsv431730 | chr17:44144214-44826056 | Weak transcription Strong transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 44 gene(s) | inside rSNPs | diseases |
38 | nsv431729 | chr17:44144214-44869063 | Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 54 gene(s) | inside rSNPs | diseases |
39 | nsv431733 | chr17:44144387-44355634 | Enhancers Weak transcription Genic enhancers Active TSS Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 33 gene(s) | inside rSNPs | diseases |
40 | nsv431734 | chr17:44144387-44364023 | Enhancers Weak transcription Strong transcription Genic enhancers Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 33 gene(s) | inside rSNPs | diseases |
41 | nsv431737 | chr17:44144387-44364056 | Weak transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS ZNF genes & repeats Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 33 gene(s) | inside rSNPs | diseases |
42 | nsv1059239 | chr17:44145589-44364158 | Strong transcription Weak transcription Genic enhancers Active TSS Enhancers Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 34 gene(s) | inside rSNPs | diseases |
43 | nsv1065032 | chr17:44148408-44364158 | Weak transcription Enhancers Bivalent/Poised TSS Flanking Active TSS Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 34 gene(s) | inside rSNPs | diseases |
44 | esv1795345 | chr17:44149955-44365116 | Weak transcription Active TSS Enhancers Flanking Active TSS Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 34 gene(s) | inside rSNPs | diseases |
45 | nsv1065797 | chr17:44150775-44364158 | Active TSS Strong transcription Weak transcription Flanking Active TSS Enhancers Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 34 gene(s) | inside rSNPs | diseases |
46 | nsv543364 | chr17:44151408-44792529 | ZNF genes & repeats Weak transcription Flanking Active TSS Enhancers Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 43 gene(s) | inside rSNPs | diseases |
47 | nsv1067056 | chr17:44151774-44364158 | Enhancers Weak transcription Genic enhancers Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 34 gene(s) | inside rSNPs | diseases |
48 | nsv1060875 | chr17:44153522-44364158 | Genic enhancers Strong transcription Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 34 gene(s) | inside rSNPs | diseases |
49 | nsv1061484 | chr17:44156069-44361997 | Weak transcription Enhancers Strong transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 33 gene(s) | inside rSNPs | diseases |
50 | nsv1059408 | chr17:44156069-44364158 | Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 34 gene(s) | inside rSNPs | diseases |
SNP | Gene | Cis/trans | Tissue | Source |
---|---|---|---|---|
rs2696534 | ARHGAP27 | Cis_1M | lymphoblastoid | RTeQTL |
rs2696534 | BPTF | Cis_chr | lymphoblastoid | RTeQTL |
rs2696534 | LRRC37A4 | Cis_1M | lymphoblastoid | RTeQTL |
rs2696534 | LOC644246 | Cis_1M | lymphoblastoid | RTeQTL |
rs2696534 | ARL17 | Cis_1M | lymphoblastoid | RTeQTL |
rs2696534 | MAPK8IP1 | trans | lymphoblastoid | RTeQTL |
rs2696534 | LRRC37A4 | cis | multi-tissue | Pritchard |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr17:44351800-44364200 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
2 | chr17:44352000-44356200 | Weak transcription | HepG2 | liver |
3 | chr17:44352200-44357000 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
4 | chr17:44353800-44364200 | Weak transcription | Fetal Intestine Small | intestine |
5 | chr17:44354800-44356800 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
6 | chr17:44355000-44356600 | Weak transcription | Stomach Mucosa | stomach |
7 | chr17:44355000-44356800 | Weak transcription | A549 | lung |
8 | chr17:44355000-44366600 | Weak transcription | Fetal Stomach | stomach |