Variant report

Variant rs1122381
Chromosome Location chr17:44205839-44205840
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:44144200-44206000 Weak transcription Esophagus oesophagus
2 chr17:44180200-44214400 Weak transcription Hela-S3 cervix
3 chr17:44186600-44210000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr17:44190800-44209200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr17:44193000-44231400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
6 chr17:44193200-44232200 Enhancers Primary T helper cells fromperipheralblood blood
7 chr17:44194000-44207200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr17:44194200-44248200 Enhancers Primary T killer naive cells fromperipheralblood blood
9 chr17:44194600-44208000 Weak transcription NHLF lung
10 chr17:44194600-44210600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
11 chr17:44194800-44214400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr17:44196200-44206000 Weak transcription H9 Cell Line embryonic stem cell
13 chr17:44196200-44206200 Weak transcription Brain Germinal Matrix brain
14 chr17:44196200-44207400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr17:44196400-44207800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
16 chr17:44197000-44225200 Enhancers Primary T helper naive cells from peripheral blood blood
17 chr17:44198000-44212800 Weak transcription Primary monocytes fromperipheralblood blood
18 chr17:44199400-44206000 Weak transcription Aorta Aorta
19 chr17:44199400-44207600 Weak transcription ES-WA7 Cell Line embryonic stem cell
20 chr17:44199800-44206000 Enhancers Primary T helper naive cells fromperipheralblood blood
21 chr17:44199800-44210000 Weak transcription Fetal Stomach stomach
22 chr17:44200000-44206000 Weak transcription Liver Liver
23 chr17:44200000-44207000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr17:44200000-44215200 Weak transcription Placenta Amnion Placenta Amnion
25 chr17:44200200-44207200 Weak transcription Fetal Muscle Leg muscle
26 chr17:44200400-44206000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr17:44200400-44206000 Weak transcription Fetal Lung lung
28 chr17:44200400-44206200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
29 chr17:44200400-44208000 Weak transcription Rectal Mucosa Donor 31 rectum
30 chr17:44200400-44208000 Weak transcription HepG2 liver
31 chr17:44200400-44211400 Weak transcription Placenta Placenta
32 chr17:44200400-44215200 Weak transcription Fetal Intestine Large intestine
33 chr17:44200600-44206200 Weak transcription Cortex derived primary cultured neurospheres brain
34 chr17:44200800-44206800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr17:44200800-44206800 Strong transcription Primary B cells from cord blood blood
36 chr17:44201200-44206000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
37 chr17:44201400-44206000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
38 chr17:44201400-44214400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr17:44201400-44216800 Weak transcription HUVEC blood vessel
40 chr17:44201400-44231200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
41 chr17:44201600-44206000 Weak transcription Fetal Brain Female brain
42 chr17:44201600-44206200 Weak transcription Spleen Spleen
43 chr17:44201600-44209600 Weak transcription NHEK skin
44 chr17:44201800-44206000 Weak transcription Sigmoid Colon Sigmoid Colon
45 chr17:44201800-44207800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr17:44201800-44210000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
47 chr17:44201800-44210000 Weak transcription Primary hematopoietic stem cells short term culture blood
48 chr17:44201800-44213000 Weak transcription HSMM muscle
49 chr17:44202200-44206000 Weak transcription Fetal Brain Male brain
50 chr17:44202200-44207400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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