Variant report

Variant rs62062773
Chromosome Location chr17:44020545-44020546
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:44016600-44021600 Enhancers Brain Anterior Caudate brain
2 chr17:44016800-44021200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
3 chr17:44016800-44021600 Enhancers Liver Liver
4 chr17:44017000-44022600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
5 chr17:44017400-44021600 Enhancers Cortex derived primary cultured neurospheres brain
6 chr17:44017800-44021600 Enhancers Adipose Nuclei Adipose
7 chr17:44018200-44021400 Enhancers Brain Hippocampus Middle brain
8 chr17:44018400-44021000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
9 chr17:44018400-44021200 Weak transcription Fetal Brain Female brain
10 chr17:44018600-44021600 Enhancers Brain Cingulate Gyrus brain
11 chr17:44018600-44026000 Weak transcription Breast Myoepithelial Primary Cells Breast
12 chr17:44018800-44025800 Weak transcription Rectal Smooth Muscle rectum
13 chr17:44019200-44021200 Enhancers HUES6 Cell Line embryonic stem cell
14 chr17:44019400-44020800 Enhancers iPS-15b Cell Line embryonic stem cell
15 chr17:44019400-44021000 Enhancers HUES48 Cell Line embryonic stem cell
16 chr17:44019400-44021200 Weak transcription Psoas Muscle Psoas
17 chr17:44019600-44020600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
18 chr17:44019600-44020800 Enhancers H1 Cell Line embryonic stem cell
19 chr17:44019600-44020800 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
20 chr17:44019600-44022000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
21 chr17:44019600-44022000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
22 chr17:44019800-44021400 Enhancers ES-I3 Cell Line embryonic stem cell
23 chr17:44020000-44021400 Genic enhancers Brain Germinal Matrix brain
24 chr17:44020000-44026000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
25 chr17:44020000-44031400 Enhancers Brain Angular Gyrus brain
26 chr17:44020200-44021000 Flanking Active TSS Brain Inferior Temporal Lobe brain
27 chr17:44020200-44021200 Flanking Active TSS Brain Substantia Nigra brain
28 chr17:44020200-44021200 Enhancers Right Atrium heart
29 chr17:44020200-44021600 Weak transcription Gastric stomach
30 chr17:44020200-44022000 Enhancers Left Ventricle heart
31 chr17:44020200-44024400 Weak transcription iPS-20b Cell Line embryonic stem cell
32 chr17:44020200-44025800 Weak transcription Stomach Smooth Muscle stomach
33 chr17:44020400-44021000 Weak transcription Right Ventricle heart
34 chr17:44020400-44021800 Enhancers Skeletal Muscle Male skeletal muscle
35 chr17:44020400-44022600 Enhancers Skeletal Muscle Female skeletal muscle
36 chr17:44020400-44025800 Weak transcription Colon Smooth Muscle Colon
37 chr17:44020400-44025800 Weak transcription Fetal Brain Male brain
38 chr17:44020400-44026000 Weak transcription H9 Cell Line embryonic stem cell

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