Variant report

Variant rs1984937
Chromosome Location chr17:43980530-43980531
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:33 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:43973600-43983400 Weak transcription Right Atrium heart
2 chr17:43977400-43981800 Weak transcription Fetal Brain Male brain
3 chr17:43978400-43982200 Weak transcription Brain Angular Gyrus brain
4 chr17:43978400-43982200 Weak transcription Psoas Muscle Psoas
5 chr17:43979400-43981000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr17:43979600-43980600 Enhancers Brain Anterior Caudate brain
7 chr17:43979800-43980600 Enhancers Left Ventricle heart
8 chr17:43980000-43980800 Enhancers Cortex derived primary cultured neurospheres brain
9 chr17:43980200-43980600 Bivalent Enhancer Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
10 chr17:43980200-43980600 Bivalent Enhancer Fetal Muscle Leg muscle
11 chr17:43980200-43980600 Flanking Active TSS Skeletal Muscle Male skeletal muscle
12 chr17:43980200-43980800 Bivalent Enhancer HUES64 Cell Line embryonic stem cell
13 chr17:43980200-43980800 Flanking Active TSS Adipose Nuclei Adipose
14 chr17:43980200-43980800 Enhancers Brain Hippocampus Middle brain
15 chr17:43980200-43980800 Enhancers Brain Substantia Nigra brain
16 chr17:43980200-43980800 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
17 chr17:43980200-43980800 Enhancers Fetal Brain Female brain
18 chr17:43980200-43980800 Flanking Active TSS Skeletal Muscle Female skeletal muscle
19 chr17:43980200-43980800 Flanking Active TSS HepG2 liver
20 chr17:43980200-43980800 Flanking Active TSS K562 blood
21 chr17:43980200-43981000 Enhancers Pancreas Pancrea
22 chr17:43980400-43980600 Enhancers Brain Germinal Matrix brain
23 chr17:43980400-43980600 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain
24 chr17:43980400-43980600 Flanking Active TSS Esophagus oesophagus
25 chr17:43980400-43980600 Flanking Active TSS Placenta Placenta
26 chr17:43980400-43980800 Bivalent Enhancer ES-I3 Cell Line embryonic stem cell
27 chr17:43980400-43980800 Bivalent Enhancer HUES6 Cell Line embryonic stem cell
28 chr17:43980400-43980800 Enhancers Breast Myoepithelial Primary Cells Breast
29 chr17:43980400-43980800 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin03 Skin
30 chr17:43980400-43980800 Enhancers Brain Cingulate Gyrus brain
31 chr17:43980400-43980800 Flanking Active TSS Brain Inferior Temporal Lobe brain
32 chr17:43980400-43980800 Flanking Active TSS A549 lung
33 chr17:43980400-43981000 Enhancers Liver Liver

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