Variant report

Variant rs1078830
Chromosome Location chr17:43946112-43946113
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:17 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:43942400-43947400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr17:43942800-43946200 Enhancers Brain Hippocampus Middle brain
3 chr17:43942800-43946400 Enhancers Brain Substantia Nigra brain
4 chr17:43943000-43946200 Enhancers Brain Cingulate Gyrus brain
5 chr17:43943400-43947200 Weak transcription ES-I3 Cell Line embryonic stem cell
6 chr17:43943400-43947400 Weak transcription HUES6 Cell Line embryonic stem cell
7 chr17:43943600-43947400 Weak transcription ES-WA7 Cell Line embryonic stem cell
8 chr17:43944000-43947800 Weak transcription iPS-15b Cell Line embryonic stem cell
9 chr17:43944800-43946200 Enhancers Brain Inferior Temporal Lobe brain
10 chr17:43944800-43946400 Enhancers Brain Anterior Caudate brain
11 chr17:43945000-43946400 Enhancers Brain Angular Gyrus brain
12 chr17:43945000-43947400 Weak transcription Cortex derived primary cultured neurospheres brain
13 chr17:43945600-43947400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
14 chr17:43945600-43951000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
15 chr17:43945800-43947400 Weak transcription K562 blood
16 chr17:43946000-43946400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr17:43946000-43946600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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