The 2.0 version of rSNPBase

Variant report

Variant rs1918787
Chromosome Location chr17:44279252-44279253
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:44271600-44302200 Weak transcription Lung lung
2 chr17:44271800-44280400 Weak transcription Gastric stomach
3 chr17:44271800-44285600 Weak transcription H9 Cell Line embryonic stem cell
4 chr17:44271800-44291600 Weak transcription Fetal Muscle Trunk muscle
5 chr17:44271800-44293400 Weak transcription Placenta Placenta
6 chr17:44271800-44302000 Weak transcription Left Ventricle heart
7 chr17:44271800-44302200 Weak transcription Esophagus oesophagus
8 chr17:44272200-44283200 Weak transcription Fetal Brain Male brain
9 chr17:44272200-44286000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
10 chr17:44272200-44302000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
11 chr17:44272400-44283000 Weak transcription Brain Anterior Caudate brain
12 chr17:44272400-44283200 Weak transcription Skeletal Muscle Female skeletal muscle
13 chr17:44272400-44285400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr17:44272400-44290000 Weak transcription Hela-S3 cervix
15 chr17:44272400-44294200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
16 chr17:44272400-44295800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
17 chr17:44272400-44302000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
18 chr17:44272600-44279400 Weak transcription Rectal Smooth Muscle rectum
19 chr17:44272600-44281600 Enhancers Primary T helper naive cells fromperipheralblood blood
20 chr17:44272600-44292600 Weak transcription Monocytes-CD14+_RO01746 blood
21 chr17:44272600-44302000 Weak transcription Primary B cells from peripheral blood blood
22 chr17:44272800-44283200 Weak transcription Brain Hippocampus Middle brain
23 chr17:44273000-44282800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
24 chr17:44273000-44283200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr17:44273000-44283200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr17:44273000-44283200 Weak transcription Brain Inferior Temporal Lobe brain
27 chr17:44273200-44282800 Weak transcription Fetal Stomach stomach
28 chr17:44273200-44283200 Weak transcription Primary B cells from cord blood blood
29 chr17:44273200-44283200 Weak transcription Primary hematopoietic stem cells blood
30 chr17:44273200-44283200 Weak transcription Brain Substantia Nigra brain
31 chr17:44273600-44292600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
32 chr17:44274000-44283200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
33 chr17:44274000-44283200 Weak transcription Psoas Muscle Psoas
34 chr17:44274000-44285600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
35 chr17:44274000-44301600 Weak transcription HUVEC blood vessel
36 chr17:44274400-44279400 Enhancers Rectal Mucosa Donor 31 rectum
37 chr17:44274400-44283000 Weak transcription Fetal Adrenal Gland Adrenal Gland
38 chr17:44274800-44291600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
39 chr17:44275200-44283000 Weak transcription Cortex derived primary cultured neurospheres brain
40 chr17:44275400-44283200 Weak transcription Primary T regulatory cells fromperipheralblood blood
41 chr17:44275400-44283200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr17:44275600-44279400 Weak transcription K562 blood
43 chr17:44275600-44281200 Weak transcription GM12878-XiMat blood
44 chr17:44275600-44281400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
45 chr17:44275600-44283200 Weak transcription Primary hematopoietic stem cells short term culture blood
46 chr17:44275600-44283200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr17:44275600-44283200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
48 chr17:44275600-44283400 Weak transcription Dnd41 blood
49 chr17:44275800-44283200 Weak transcription NHEK skin
50 chr17:44276200-44282800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015