The 2.0 version of rSNPBase

Variant report

Variant rs2696609
Chromosome Location chr17:44293205-44293206
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:44271600-44302200 Weak transcription Lung lung
2 chr17:44271800-44293400 Weak transcription Placenta Placenta
3 chr17:44271800-44302000 Weak transcription Left Ventricle heart
4 chr17:44271800-44302200 Weak transcription Esophagus oesophagus
5 chr17:44272200-44302000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr17:44272400-44294200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
7 chr17:44272400-44295800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
8 chr17:44272400-44302000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
9 chr17:44272600-44302000 Weak transcription Primary B cells from peripheral blood blood
10 chr17:44274000-44301600 Weak transcription HUVEC blood vessel
11 chr17:44277600-44302200 Weak transcription NH-A brain
12 chr17:44278600-44302000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
13 chr17:44278600-44302000 Weak transcription Right Atrium heart
14 chr17:44279600-44301600 Weak transcription Ovary ovary
15 chr17:44280600-44301600 Weak transcription Colonic Mucosa Colon
16 chr17:44280800-44301600 Weak transcription Duodenum Mucosa Duodenum
17 chr17:44281600-44301600 Weak transcription Pancreas Pancrea
18 chr17:44284000-44296800 Weak transcription Cortex derived primary cultured neurospheres brain
19 chr17:44284200-44302200 Weak transcription Primary hematopoietic stem cells blood
20 chr17:44286200-44302000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
21 chr17:44286200-44302400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
22 chr17:44286400-44295800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
23 chr17:44286800-44301600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
24 chr17:44288400-44294200 Weak transcription Stomach Smooth Muscle stomach
25 chr17:44289000-44302600 Weak transcription Skeletal Muscle Male skeletal muscle
26 chr17:44290400-44294200 Weak transcription Liver Liver
27 chr17:44290400-44295600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
28 chr17:44290400-44301000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
29 chr17:44290400-44301400 Weak transcription ES-I3 Cell Line embryonic stem cell
30 chr17:44290400-44301600 Weak transcription Hela-S3 cervix
31 chr17:44290600-44298400 Strong transcription A549 lung
32 chr17:44290600-44301400 Weak transcription K562 blood
33 chr17:44290600-44301600 Weak transcription NHLF lung
34 chr17:44290600-44301600 Weak transcription Osteobl bone
35 chr17:44290600-44302400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
36 chr17:44290600-44302600 Weak transcription Fetal Heart heart
37 chr17:44290800-44295600 Weak transcription Primary T helper naive cells fromperipheralblood blood
38 chr17:44290800-44302000 Weak transcription Primary T killer naive cells fromperipheralblood blood
39 chr17:44290800-44302600 Weak transcription Primary T helper naive cells from peripheral blood blood
40 chr17:44290800-44302600 Weak transcription Stomach Mucosa stomach
41 chr17:44291000-44297200 Strong transcription iPS-18 Cell Line embryonic stem cell
42 chr17:44291200-44298400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr17:44291400-44293600 Strong transcription iPS-20b Cell Line embryonic stem cell
44 chr17:44291400-44293600 Strong transcription HepG2 liver
45 chr17:44291400-44294200 Strong transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr17:44291400-44294400 Strong transcription HSMM muscle
47 chr17:44291400-44296200 Strong transcription Rectal Mucosa Donor 29 rectum
48 chr17:44291400-44297200 Strong transcription NHEK skin
49 chr17:44291600-44294400 Strong transcription Fetal Muscle Leg muscle
50 chr17:44291600-44294400 Strong transcription Dnd41 blood

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Last update: Aug 31, 2015