The 2.0 version of rSNPBase

Variant report

Variant rs2619548
Chromosome Location chr6:15633785-15633786
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:15597000-15641600 Weak transcription Spleen Spleen
2 chr6:15600000-15660400 Weak transcription Hela-S3 cervix
3 chr6:15610600-15640200 Weak transcription Aorta Aorta
4 chr6:15611800-15641800 Weak transcription Fetal Muscle Trunk muscle
5 chr6:15614800-15641600 Weak transcription Lung lung
6 chr6:15615000-15652600 Weak transcription Colonic Mucosa Colon
7 chr6:15615200-15641000 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr6:15615200-15642200 Weak transcription Thymus Thymus
9 chr6:15615200-15662200 Weak transcription Gastric stomach
10 chr6:15615400-15643000 Weak transcription Primary T regulatory cells fromperipheralblood blood
11 chr6:15615600-15639000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr6:15616800-15638600 Weak transcription Psoas Muscle Psoas
13 chr6:15616800-15662000 Weak transcription Placenta Placenta
14 chr6:15616800-15662200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr6:15621800-15662200 Weak transcription Pancreas Pancrea
16 chr6:15622200-15637800 Weak transcription Small Intestine intestine
17 chr6:15622200-15638800 Weak transcription Breast Myoepithelial Primary Cells Breast
18 chr6:15622200-15641000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
19 chr6:15622200-15641600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr6:15622200-15641800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr6:15622200-15643600 Weak transcription Fetal Adrenal Gland Adrenal Gland
22 chr6:15622200-15649200 Weak transcription Skeletal Muscle Female skeletal muscle
23 chr6:15623600-15641000 Weak transcription Brain Hippocampus Middle brain
24 chr6:15623600-15643200 Weak transcription Duodenum Smooth Muscle Duodenum
25 chr6:15623800-15638800 Weak transcription Fetal Muscle Leg muscle
26 chr6:15623800-15639000 Weak transcription Left Ventricle heart
27 chr6:15623800-15662000 Weak transcription Stomach Smooth Muscle stomach
28 chr6:15624400-15641600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr6:15624400-15642000 Weak transcription Skeletal Muscle Male skeletal muscle
30 chr6:15626400-15639000 Weak transcription Rectal Smooth Muscle rectum
31 chr6:15626400-15641000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
32 chr6:15626600-15637200 Weak transcription Primary neutrophils fromperipheralblood blood
33 chr6:15627400-15636000 Weak transcription Rectal Mucosa Donor 29 rectum
34 chr6:15627800-15636000 Weak transcription Primary monocytes fromperipheralblood blood
35 chr6:15627800-15636000 Weak transcription Primary B cells from peripheral blood blood
36 chr6:15627800-15636000 Weak transcription Fetal Thymus thymus
37 chr6:15627800-15637400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
38 chr6:15628600-15662000 Weak transcription NHLF lung
39 chr6:15629400-15634800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr6:15629400-15635600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr6:15629400-15635800 Weak transcription Primary T cells fromperipheralblood blood
42 chr6:15629400-15636400 Weak transcription Primary hematopoietic stem cells short term culture blood
43 chr6:15629400-15637000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
44 chr6:15629400-15640400 Weak transcription Primary T killer naive cells fromperipheralblood blood
45 chr6:15629400-15641600 Weak transcription Fetal Stomach stomach
46 chr6:15629400-15641800 Weak transcription HMEC breast
47 chr6:15629400-15641800 Weak transcription NHEK skin
48 chr6:15629400-15642200 Weak transcription NHDF-Ad bronchial
49 chr6:15629400-15642600 Weak transcription Fetal Lung lung
50 chr6:15629400-15649200 Weak transcription HSMM muscle

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Last update: Aug 31, 2015