Variant report

Variant rs2799496
Chromosome Location chr10:38243799-38243800
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:106 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:38236400-38243800 Weak transcription Fetal Stomach stomach
2 chr10:38236800-38249000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
3 chr10:38237800-38247200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
4 chr10:38238000-38244200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr10:38238000-38248600 Strong transcription Cortex derived primary cultured neurospheres brain
6 chr10:38238400-38253000 Weak transcription Fetal Intestine Small intestine
7 chr10:38238600-38246400 Strong transcription Psoas Muscle Psoas
8 chr10:38238800-38248600 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
9 chr10:38239000-38247000 Strong transcription Left Ventricle heart
10 chr10:38239000-38249400 Strong transcription Fetal Muscle Trunk muscle
11 chr10:38239200-38246600 Strong transcription Duodenum Mucosa Duodenum
12 chr10:38239200-38248000 Strong transcription Adipose Nuclei Adipose
13 chr10:38239400-38247400 Strong transcription Skeletal Muscle Female skeletal muscle
14 chr10:38239400-38247800 Strong transcription Brain Hippocampus Middle brain
15 chr10:38239400-38248200 Strong transcription Fetal Adrenal Gland Adrenal Gland
16 chr10:38239600-38245800 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr10:38239600-38246400 Strong transcription Brain Substantia Nigra brain
18 chr10:38239600-38264400 Weak transcription Fetal Heart heart
19 chr10:38239600-38264600 Weak transcription Stomach Mucosa stomach
20 chr10:38240000-38246600 Strong transcription Brain Inferior Temporal Lobe brain
21 chr10:38240000-38247600 Strong transcription Duodenum Smooth Muscle Duodenum
22 chr10:38240200-38244400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr10:38240200-38247800 Strong transcription Skeletal Muscle Male skeletal muscle
24 chr10:38240400-38244200 Strong transcription Primary T helper memory cells from peripheral blood 2 blood
25 chr10:38240400-38246800 Strong transcription Primary T cells fromperipheralblood blood
26 chr10:38240400-38247600 Strong transcription Fetal Lung lung
27 chr10:38240400-38249200 Strong transcription Ovary ovary
28 chr10:38240600-38244000 Strong transcription Aorta Aorta
29 chr10:38240600-38244600 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
30 chr10:38240600-38247400 Strong transcription Rectal Mucosa Donor 29 rectum
31 chr10:38240600-38247400 Strong transcription NHDF-Ad bronchial
32 chr10:38240600-38247800 Strong transcription Primary T helper naive cells from peripheral blood blood
33 chr10:38240600-38248200 Strong transcription Fetal Muscle Leg muscle
34 chr10:38240800-38243800 Strong transcription Primary T killer memory cells from peripheral blood blood
35 chr10:38240800-38244000 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
36 chr10:38240800-38246400 Strong transcription Muscle Satellite Cultured Cells --
37 chr10:38240800-38264000 Weak transcription NHLF lung
38 chr10:38241000-38243800 ZNF genes & repeats iPS-18 Cell Line embryonic stem cell
39 chr10:38241000-38243800 Strong transcription Primary T helper memory cells from peripheral blood 1 blood
40 chr10:38241000-38244400 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
41 chr10:38241000-38244400 Strong transcription Fetal Brain Male brain
42 chr10:38241000-38245200 Strong transcription Fetal Intestine Large intestine
43 chr10:38241000-38246000 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
44 chr10:38241000-38246400 Strong transcription Brain Germinal Matrix brain
45 chr10:38241000-38246600 Strong transcription Colon Smooth Muscle Colon
46 chr10:38241000-38247400 Strong transcription Brain Angular Gyrus brain
47 chr10:38241000-38247400 Strong transcription Brain Cingulate Gyrus brain
48 chr10:38241000-38247800 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
49 chr10:38241000-38248200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
50 chr10:38241200-38243800 ZNF genes & repeats GM12878-XiMat blood

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