Variant report
| Variant | rs28548848 |
|---|---|
| Chromosome Location | chr9:93816838-93816839 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:84)
| rs_ID | r2[population] |
|---|---|
| rs10123625 | 1.00[EUR][1000 genomes];0.98[ASN][1000 genomes] |
| rs10512204 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs10991749 | 1.00[EUR][1000 genomes] |
| rs1460828 | 1.00[EUR][1000 genomes];0.81[ASN][1000 genomes] |
| rs1542478 | 1.00[EUR][1000 genomes];0.98[ASN][1000 genomes] |
| rs1585456 | 1.00[EUR][1000 genomes] |
| rs1585457 | 1.00[EUR][1000 genomes] |
| rs1585458 | 1.00[EUR][1000 genomes] |
| rs1585459 | 1.00[EUR][1000 genomes] |
| rs16907076 | 1.00[EUR][1000 genomes] |
| rs16907078 | 1.00[EUR][1000 genomes] |
| rs16907083 | 1.00[EUR][1000 genomes] |
| rs16907088 | 1.00[EUR][1000 genomes] |
| rs16907095 | 1.00[EUR][1000 genomes];0.81[ASN][1000 genomes] |
| rs16907097 | 1.00[EUR][1000 genomes];0.81[ASN][1000 genomes] |
| rs16907114 | 1.00[EUR][1000 genomes];0.98[ASN][1000 genomes] |
| rs16907129 | 1.00[EUR][1000 genomes] |
| rs1841446 | 1.00[EUR][1000 genomes];0.81[ASN][1000 genomes] |
| rs28406163 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs28498576 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs28508244 | 0.81[ASN][1000 genomes] |
| rs28629371 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs28720686 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs4991707 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs55796701 | 1.00[EUR][1000 genomes] |
| rs55837511 | 1.00[EUR][1000 genomes] |
| rs56046303 | 1.00[EUR][1000 genomes] |
| rs56099287 | 1.00[EUR][1000 genomes];0.81[ASN][1000 genomes] |
| rs56215441 | 1.00[EUR][1000 genomes] |
| rs56286690 | 1.00[EUR][1000 genomes] |
| rs56748053 | 1.00[EUR][1000 genomes] |
| rs57600683 | 1.00[EUR][1000 genomes] |
| rs57756037 | 1.00[EUR][1000 genomes] |
| rs57874603 | 1.00[EUR][1000 genomes] |
| rs58087771 | 1.00[EUR][1000 genomes] |
| rs58145618 | 1.00[EUR][1000 genomes] |
| rs58848158 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs58968598 | 1.00[EUR][1000 genomes] |
| rs59262734 | 1.00[EUR][1000 genomes] |
| rs59306422 | 1.00[EUR][1000 genomes] |
| rs59874266 | 1.00[EUR][1000 genomes] |
| rs60129254 | 1.00[EUR][1000 genomes] |
| rs60691320 | 1.00[EUR][1000 genomes] |
| rs60805834 | 1.00[EUR][1000 genomes] |
| rs61300432 | 1.00[EUR][1000 genomes] |
| rs61647505 | 1.00[EUR][1000 genomes] |
| rs6479324 | 1.00[EUR][1000 genomes];0.96[ASN][1000 genomes] |
| rs6479326 | 1.00[EUR][1000 genomes];0.96[ASN][1000 genomes] |
| rs6479327 | 1.00[EUR][1000 genomes];0.96[ASN][1000 genomes] |
| rs7020346 | 1.00[EUR][1000 genomes] |
| rs7024221 | 1.00[EUR][1000 genomes] |
| rs7025659 | 1.00[EUR][1000 genomes];0.96[ASN][1000 genomes] |
| rs7025935 | 1.00[EUR][1000 genomes];0.96[ASN][1000 genomes] |
| rs7032345 | 1.00[EUR][1000 genomes] |
| rs7034744 | 1.00[EUR][1000 genomes] |
| rs7035409 | 1.00[EUR][1000 genomes] |
| rs7039162 | 1.00[EUR][1000 genomes] |
| rs7039179 | 1.00[EUR][1000 genomes] |
| rs7039199 | 1.00[EUR][1000 genomes] |
| rs7042483 | 1.00[EUR][1000 genomes] |
| rs7047670 | 1.00[EUR][1000 genomes] |
| rs73492522 | 1.00[EUR][1000 genomes] |
| rs73492530 | 1.00[EUR][1000 genomes] |
| rs73492532 | 1.00[EUR][1000 genomes] |
| rs73492542 | 1.00[EUR][1000 genomes] |
| rs73492545 | 1.00[EUR][1000 genomes] |
| rs73492551 | 1.00[EUR][1000 genomes] |
| rs73505587 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73653522 | 1.00[EUR][1000 genomes] |
| rs73653527 | 1.00[EUR][1000 genomes] |
| rs751279 | 1.00[EUR][1000 genomes];0.92[ASN][1000 genomes] |
| rs753789 | 1.00[EUR][1000 genomes];0.82[ASN][1000 genomes] |
| rs753790 | 1.00[EUR][1000 genomes];0.90[ASN][1000 genomes] |
| rs753791 | 1.00[EUR][1000 genomes];0.90[ASN][1000 genomes] |
| rs7852422 | 1.00[EUR][1000 genomes] |
| rs7854907 | 1.00[EUR][1000 genomes] |
| rs7855222 | 1.00[EUR][1000 genomes] |
| rs7855269 | 1.00[EUR][1000 genomes] |
| rs7856489 | 1.00[EUR][1000 genomes] |
| rs7856691 | 1.00[EUR][1000 genomes] |
| rs7859976 | 1.00[EUR][1000 genomes] |
| rs7867663 | 1.00[EUR][1000 genomes] |
| rs7870440 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs7873869 | 1.00[EUR][1000 genomes];0.81[ASN][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr9:93810200-93823000 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 2 | chr9:93816400-93817200 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
| 3 | chr9:93816400-93817600 | Weak transcription | HUVEC | blood vessel |
