Variant report

Variant	rs28861728
Chromosome Location	chr8:49712452-49712453
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:49711422..49713759-chr8:49716191..49717743,2	MCF-7	breast:

rs_ID	r²[population]
rs10094086	0.86[AFR][1000 genomes]
rs10094476	0.90[AFR][1000 genomes]
rs10099006	0.86[AFR][1000 genomes]
rs10100402	0.96[AFR][1000 genomes]
rs10103893	0.90[AFR][1000 genomes]
rs10104194	0.87[AFR][1000 genomes]
rs10108968	0.83[AFR][1000 genomes]
rs10109238	0.87[AFR][1000 genomes]
rs10504068	0.90[AFR][1000 genomes]
rs16938740	0.90[AFR][1000 genomes]
rs16938748	0.90[AFR][1000 genomes]
rs16938750	0.90[AFR][1000 genomes]
rs16938756	0.90[AFR][1000 genomes]
rs16938764	0.96[AFR][1000 genomes]
rs16938765	0.96[AFR][1000 genomes]
rs16938767	0.96[AFR][1000 genomes]
rs28377247	0.96[AFR][1000 genomes]
rs28477899	0.96[AFR][1000 genomes]
rs28556954	0.87[AFR][1000 genomes]
rs28649400	0.84[AFR][1000 genomes]
rs28702592	0.96[AFR][1000 genomes]
rs28709071	0.87[AFR][1000 genomes]
rs28772946	0.96[AFR][1000 genomes]
rs28781607	0.87[AFR][1000 genomes]
rs56184941	0.96[AFR][1000 genomes]
rs58750692	0.83[AFR][1000 genomes]
rs60181153	0.96[AFR][1000 genomes]
rs60465098	0.89[AFR][1000 genomes]
rs61184099	0.83[AFR][1000 genomes]
rs6472052	0.96[AFR][1000 genomes]
rs6472053	0.96[AFR][1000 genomes]
rs6981279	0.87[AFR][1000 genomes]
rs6988916	0.87[AFR][1000 genomes]
rs73678187	0.83[AFR][1000 genomes]
rs73678188	0.83[AFR][1000 genomes]
rs73678200	0.87[AFR][1000 genomes]
rs73678201	0.87[AFR][1000 genomes]
rs73680707	0.90[AFR][1000 genomes]
rs73680710	0.90[AFR][1000 genomes]
rs73680711	0.90[AFR][1000 genomes]
rs73680714	0.96[AFR][1000 genomes]
rs73680715	0.96[AFR][1000 genomes]
rs73680718	0.96[AFR][1000 genomes]
rs73680720	0.83[AFR][1000 genomes]
rs7819693	0.87[AFR][1000 genomes]
rs7825162	0.90[AFR][1000 genomes]
rs7826258	0.96[AFR][1000 genomes]
rs7826724	0.90[AFR][1000 genomes]
rs7838334	0.90[AFR][1000 genomes]
rs7839672	0.96[AFR][1000 genomes]
rs7842381	0.96[AFR][1000 genomes]
rs9298065	0.90[AFR][1000 genomes]
rs9886548	0.83[AFR][1000 genomes]

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:49703000-49716800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr8:49712400-49713000	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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