Variant report

Variant	rs73680715
Chromosome Location	chr8:49712709-49712710
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:49711422..49713759-chr8:49716191..49717743,2	MCF-7	breast:

Extended variants
information (count: 64 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:64)

rs_ID	r²[population]
rs10088413	1.00[AMR][1000 genomes]
rs10094086	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10094476	0.93[AFR][1000 genomes]
rs10099006	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10099447	1.00[AMR][1000 genomes]
rs10100402	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10103893	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10104103	1.00[AMR][1000 genomes]
rs10104194	0.84[AFR][1000 genomes]
rs10108968	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10109238	0.84[AFR][1000 genomes]
rs10504068	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16938362	1.00[AMR][1000 genomes]
rs16938537	1.00[AMR][1000 genomes]
rs16938740	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16938748	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16938750	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16938756	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16938764	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16938765	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16938767	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28377247	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28404323	1.00[AMR][1000 genomes]
rs28477899	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28496662	1.00[AMR][1000 genomes]
rs28556954	0.84[AFR][1000 genomes]
rs28602767	1.00[AMR][1000 genomes]
rs28649400	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28702592	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28709071	0.84[AFR][1000 genomes]
rs28772946	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28781607	0.84[AFR][1000 genomes]
rs28861728	0.96[AFR][1000 genomes]
rs56184941	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57965549	1.00[AMR][1000 genomes]
rs60181153	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60465098	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61184099	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6472052	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6472053	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6472107	1.00[AMR][1000 genomes]
rs6981279	0.90[AFR][1000 genomes]
rs6988916	0.84[AFR][1000 genomes]
rs6992694	1.00[AMR][1000 genomes]
rs7000393	1.00[AMR][1000 genomes]
rs73678167	1.00[AMR][1000 genomes]
rs73678200	0.84[AFR][1000 genomes]
rs73678201	0.84[AFR][1000 genomes]
rs73680707	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73680710	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73680711	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73680714	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73680718	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73680720	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73680726	1.00[AMR][1000 genomes]
rs73680728	1.00[AMR][1000 genomes]
rs7819693	0.84[AFR][1000 genomes]
rs7825162	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7826258	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7826724	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7838334	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7839672	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7842381	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9298065	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:49703000-49716800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr8:49712400-49713000	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr8:49712600-49712800	Bivalent Enhancer	ES-UCSF4 Cell Line	embryonic stem cell

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