Variant report

Variant	rs28404323
Chromosome Location	chr8:49661728-49661729
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:49657699..49660104-chr8:49660800..49663399,2	K562	blood:

Extended variants
information (count: 53 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:52)

rs_ID	r²[population]
rs10088413	1.00[AMR][1000 genomes]
rs10094086	1.00[AMR][1000 genomes]
rs10099006	1.00[AMR][1000 genomes]
rs10099447	1.00[AMR][1000 genomes]
rs10100402	1.00[AMR][1000 genomes]
rs10103893	1.00[AMR][1000 genomes]
rs10104103	1.00[AMR][1000 genomes]
rs10108968	1.00[AMR][1000 genomes]
rs10504068	1.00[AMR][1000 genomes]
rs16938362	1.00[AMR][1000 genomes]
rs16938537	1.00[AMR][1000 genomes]
rs16938740	1.00[AMR][1000 genomes]
rs16938748	1.00[AMR][1000 genomes]
rs16938750	1.00[AMR][1000 genomes]
rs16938756	1.00[AMR][1000 genomes]
rs16938764	1.00[AMR][1000 genomes]
rs16938765	1.00[AMR][1000 genomes]
rs16938767	1.00[AMR][1000 genomes]
rs28377247	1.00[AMR][1000 genomes]
rs28477899	1.00[AMR][1000 genomes]
rs28496662	1.00[AMR][1000 genomes]
rs28602767	1.00[AMR][1000 genomes]
rs28649400	1.00[AMR][1000 genomes]
rs28702592	1.00[AMR][1000 genomes]
rs28772946	1.00[AMR][1000 genomes]
rs56184941	1.00[AMR][1000 genomes]
rs57965549	1.00[AMR][1000 genomes]
rs60181153	1.00[AMR][1000 genomes]
rs60465098	1.00[AMR][1000 genomes]
rs61184099	1.00[AMR][1000 genomes]
rs6472052	1.00[AMR][1000 genomes]
rs6472053	1.00[AMR][1000 genomes]
rs6472107	1.00[AMR][1000 genomes]
rs6992694	1.00[AMR][1000 genomes]
rs7000393	1.00[AMR][1000 genomes]
rs73678167	1.00[AMR][1000 genomes]
rs73680707	1.00[AMR][1000 genomes]
rs73680710	1.00[AMR][1000 genomes]
rs73680711	1.00[AMR][1000 genomes]
rs73680714	1.00[AMR][1000 genomes]
rs73680715	1.00[AMR][1000 genomes]
rs73680718	1.00[AMR][1000 genomes]
rs73680720	1.00[AMR][1000 genomes]
rs73680726	1.00[AMR][1000 genomes]
rs73680728	1.00[AMR][1000 genomes]
rs7825162	1.00[AMR][1000 genomes]
rs7826258	1.00[AMR][1000 genomes]
rs7826724	1.00[AMR][1000 genomes]
rs7838334	1.00[AMR][1000 genomes]
rs7839672	1.00[AMR][1000 genomes]
rs7842381	1.00[AMR][1000 genomes]
rs9298065	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2761425	chr8:49658066-49669601	Weak transcription Enhancers Strong transcription ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:49656800-49662400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr8:49660200-49661800	Enhancers	NHDF-Ad	bronchial
3	chr8:49660400-49662400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
4	chr8:49661000-49668200	Weak transcription	Pancreas	Pancrea
5	chr8:49661200-49661800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr8:49661200-49662400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
7	chr8:49661400-49666000	Weak transcription	Muscle Satellite Cultured Cells	--
8	chr8:49661600-49666000	Weak transcription	Osteobl	bone

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