Variant report

Variant	rs16938362
Chromosome Location	chr8:49570413-49570414
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:49565766..49568245-chr8:49569048..49571269,2	MCF-7	breast:

rs_ID	r²[population]
rs10089076	0.92[AFR][1000 genomes]
rs10090292	0.92[AFR][1000 genomes]
rs10094086	1.00[AMR][1000 genomes]
rs10098793	0.92[AFR][1000 genomes]
rs10099006	1.00[AMR][1000 genomes]
rs10099443	0.92[AFR][1000 genomes]
rs10100402	1.00[AMR][1000 genomes]
rs10103893	1.00[AMR][1000 genomes]
rs10108968	1.00[AMR][1000 genomes]
rs10504068	1.00[AMR][1000 genomes]
rs1384218	0.92[AFR][1000 genomes]
rs16938326	0.96[AFR][1000 genomes]
rs16938489	0.92[AFR][1000 genomes]
rs16938498	0.92[AFR][1000 genomes]
rs16938500	0.92[AFR][1000 genomes]
rs16938537	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16938740	1.00[AMR][1000 genomes]
rs16938748	1.00[AMR][1000 genomes]
rs16938750	1.00[AMR][1000 genomes]
rs16938756	1.00[AMR][1000 genomes]
rs16938764	1.00[AMR][1000 genomes]
rs16938765	1.00[AMR][1000 genomes]
rs16938767	1.00[AMR][1000 genomes]
rs28377247	1.00[AMR][1000 genomes]
rs28404323	1.00[AMR][1000 genomes]
rs28477899	1.00[AMR][1000 genomes]
rs28573934	0.92[AFR][1000 genomes]
rs28602767	1.00[AMR][1000 genomes]
rs28649400	1.00[AMR][1000 genomes]
rs28702592	1.00[AMR][1000 genomes]
rs28772946	1.00[AMR][1000 genomes]
rs56184941	1.00[AMR][1000 genomes]
rs57965549	1.00[AMR][1000 genomes]
rs60181153	1.00[AMR][1000 genomes]
rs60465098	1.00[AMR][1000 genomes]
rs61184099	1.00[AMR][1000 genomes]
rs6472052	1.00[AMR][1000 genomes]
rs6472053	1.00[AMR][1000 genomes]
rs6472107	1.00[AMR][1000 genomes]
rs6992694	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7017560	0.92[AFR][1000 genomes]
rs73678167	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73680707	1.00[AMR][1000 genomes]
rs73680710	1.00[AMR][1000 genomes]
rs73680711	1.00[AMR][1000 genomes]
rs73680714	1.00[AMR][1000 genomes]
rs73680715	1.00[AMR][1000 genomes]
rs73680718	1.00[AMR][1000 genomes]
rs73680720	1.00[AMR][1000 genomes]
rs73680726	1.00[AMR][1000 genomes]
rs73680728	1.00[AMR][1000 genomes]
rs7825162	1.00[AMR][1000 genomes]
rs7826258	1.00[AMR][1000 genomes]
rs7826724	1.00[AMR][1000 genomes]
rs7838334	1.00[AMR][1000 genomes]
rs7839672	1.00[AMR][1000 genomes]
rs7842381	1.00[AMR][1000 genomes]
rs9298065	1.00[AMR][1000 genomes]
rs9694357	0.92[AFR][1000 genomes]

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:49563200-49572800	Weak transcription	Pancreas	Pancrea
2	chr8:49564400-49571200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
3	chr8:49567400-49575800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
4	chr8:49570000-49571200	Weak transcription	H9 Cell Line	embryonic stem cell
5	chr8:49570000-49572000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr8:49570000-49584000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr8:49570200-49575200	Weak transcription	Fetal Lung	lung

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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