The 2.0 version of rSNPBase

Variant report

Variant rs2911575
Chromosome Location chr1:85162753-85162754
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:85157000-85163000 Weak transcription Aorta Aorta
2 chr1:85157000-85164000 Weak transcription Fetal Lung lung
3 chr1:85157000-85164600 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr1:85157200-85162800 Weak transcription NHDF-Ad bronchial
5 chr1:85157200-85163000 Weak transcription Rectal Smooth Muscle rectum
6 chr1:85157200-85163400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr1:85157200-85163800 Weak transcription Brain Hippocampus Middle brain
8 chr1:85157400-85162800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
9 chr1:85157400-85162800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
10 chr1:85157400-85162800 Weak transcription Fetal Brain Male brain
11 chr1:85157400-85163000 Weak transcription iPS-15b Cell Line embryonic stem cell
12 chr1:85157400-85163000 Weak transcription Colon Smooth Muscle Colon
13 chr1:85157400-85163000 Weak transcription Esophagus oesophagus
14 chr1:85157400-85163000 Weak transcription HSMM muscle
15 chr1:85157400-85163000 Weak transcription NHLF lung
16 chr1:85157400-85163200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
17 chr1:85157400-85163400 Weak transcription Fetal Muscle Leg muscle
18 chr1:85157400-85164000 Weak transcription Fetal Brain Female brain
19 chr1:85157400-85167200 Weak transcription Psoas Muscle Psoas
20 chr1:85158000-85162800 Weak transcription Stomach Smooth Muscle stomach
21 chr1:85158200-85163200 Weak transcription H1 Cell Line embryonic stem cell
22 chr1:85158200-85164000 Weak transcription Brain Substantia Nigra brain
23 chr1:85158600-85163200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
24 chr1:85158600-85163400 Weak transcription Stomach Mucosa stomach
25 chr1:85158800-85162800 Weak transcription Fetal Intestine Large intestine
26 chr1:85158800-85163400 Weak transcription Duodenum Smooth Muscle Duodenum
27 chr1:85159000-85163400 Weak transcription Small Intestine intestine
28 chr1:85159000-85163800 Weak transcription Fetal Kidney kidney
29 chr1:85159000-85164000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr1:85159200-85163800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr1:85159200-85164800 Weak transcription Primary hematopoietic stem cells short term culture blood
32 chr1:85159600-85164000 Weak transcription Fetal Thymus thymus
33 chr1:85159600-85164200 Weak transcription Primary T cells from cord blood blood
34 chr1:85161200-85162800 Weak transcription Fetal Intestine Small intestine
35 chr1:85162000-85163000 Weak transcription K562 blood
36 chr1:85162000-85163200 Weak transcription HUES48 Cell Line embryonic stem cell
37 chr1:85162400-85162800 Weak transcription HMEC breast
38 chr1:85162600-85164200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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Last update: Aug 31, 2015