Variant report
| Variant | rs9662145 |
|---|---|
| Chromosome Location | chr1:85195599-85195600 |
| allele | A/C |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:34)
| rs_ID | r2[population] |
|---|---|
| rs11578078 | 0.95[ASN][1000 genomes] |
| rs12022113 | 0.93[ASN][1000 genomes] |
| rs12120614 | 0.84[ASN][1000 genomes] |
| rs1340527 | 0.87[ASN][1000 genomes] |
| rs1340528 | 0.87[ASN][1000 genomes] |
| rs2298076 | 0.80[ASN][1000 genomes] |
| rs2911567 | 0.80[ASN][1000 genomes] |
| rs2911571 | 0.87[ASN][1000 genomes] |
| rs2911575 | 0.87[ASN][1000 genomes] |
| rs2911578 | 0.87[ASN][1000 genomes] |
| rs2911583 | 0.84[ASN][1000 genomes] |
| rs2994429 | 0.87[ASN][1000 genomes] |
| rs2994437 | 0.80[ASN][1000 genomes] |
| rs2994439 | 0.80[ASN][1000 genomes] |
| rs2994440 | 0.80[ASN][1000 genomes] |
| rs2994449 | 0.89[ASN][1000 genomes] |
| rs2994941 | 0.80[ASN][1000 genomes] |
| rs2994949 | 0.80[ASN][1000 genomes] |
| rs3096445 | 0.82[ASN][1000 genomes] |
| rs3768238 | 0.86[ASN][1000 genomes] |
| rs3782 | 0.80[ASN][1000 genomes] |
| rs4390189 | 0.87[ASN][1000 genomes] |
| rs4551615 | 0.87[ASN][1000 genomes] |
| rs56681543 | 0.85[ASN][1000 genomes] |
| rs6576722 | 0.88[ASN][1000 genomes] |
| rs6576723 | 0.89[ASN][1000 genomes] |
| rs6670415 | 0.86[ASN][1000 genomes] |
| rs6670434 | 0.81[ASN][1000 genomes] |
| rs6682889 | 0.86[ASN][1000 genomes] |
| rs6687220 | 0.86[ASN][1000 genomes] |
| rs818525 | 0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes] |
| rs818526 | 0.91[EUR][1000 genomes] |
| rs818527 | 0.87[AFR][1000 genomes];0.81[EUR][1000 genomes] |
| rs9661716 | 0.85[ASN][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:85190600-85199800 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 2 | chr1:85192000-85195600 | Enhancers | Muscle Satellite Cultured Cells | -- |
