Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:57499663..57502939-chr5:57754514..57757581,3	MCF-7	breast:
2	chr5:57498702..57501666-chr5:57749557..57751506,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000145632	Chromatin interaction

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs13155421	1.00[AFR][1000 genomes]
rs13168168	1.00[AFR][1000 genomes]
rs13170721	1.00[AFR][1000 genomes]
rs13185712	1.00[AFR][1000 genomes]
rs1549243	1.00[AFR][1000 genomes];0.89[EUR][1000 genomes]
rs16887923	1.00[AFR][1000 genomes]
rs17369645	1.00[AFR][1000 genomes]
rs17433525	1.00[AFR][1000 genomes]
rs17750857	1.00[AFR][1000 genomes]
rs17750946	1.00[AFR][1000 genomes]
rs17751024	1.00[AFR][1000 genomes]
rs1862539	1.00[CEU][hapmap];1.00[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs2052547	0.90[AMR][1000 genomes]
rs2216683	1.00[CEU][hapmap];0.80[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2910567	1.00[CEU][hapmap]
rs2910612	1.00[CEU][hapmap];1.00[AFR][1000 genomes];0.89[EUR][1000 genomes]
rs2962021	1.00[AFR][1000 genomes];0.89[EUR][1000 genomes]
rs2964173	1.00[CEU][hapmap];0.88[JPT][hapmap];1.00[EUR][1000 genomes]
rs2964174	0.93[EUR][1000 genomes]
rs2964195	0.90[AMR][1000 genomes]
rs2964209	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34357926	1.00[AFR][1000 genomes]
rs35132533	1.00[AFR][1000 genomes]
rs35629187	1.00[AFR][1000 genomes]
rs4340877	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs58405952	1.00[AFR][1000 genomes]
rs71624189	1.00[AFR][1000 genomes]
rs71624191	1.00[AFR][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:57498400-57505400	Weak transcription	Pancreatic Islets	Pancreatic Islet
2	chr5:57501400-57502600	Weak transcription	Aorta	Aorta

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