The 2.0 version of rSNPBase

Variant report

Variant rs2994445
Chromosome Location chr1:85107954-85107955
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:85087000-85147400 Weak transcription Gastric stomach
2 chr1:85099000-85109600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
3 chr1:85099000-85115600 Weak transcription Cortex derived primary cultured neurospheres brain
4 chr1:85099000-85123400 Weak transcription H9 Cell Line embryonic stem cell
5 chr1:85099200-85109200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr1:85099200-85109800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
7 chr1:85099200-85115000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
8 chr1:85099200-85121400 Weak transcription NHDF-Ad bronchial
9 chr1:85099200-85138200 Weak transcription ES-I3 Cell Line embryonic stem cell
10 chr1:85099400-85115000 Weak transcription Osteobl bone
11 chr1:85099400-85131200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr1:85099600-85122600 Weak transcription Fetal Brain Male brain
13 chr1:85100600-85112400 Weak transcription Rectal Mucosa Donor 31 rectum
14 chr1:85100600-85116800 Weak transcription Rectal Mucosa Donor 29 rectum
15 chr1:85101000-85123200 Weak transcription Fetal Kidney kidney
16 chr1:85101000-85124400 Weak transcription Hela-S3 cervix
17 chr1:85101400-85109000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr1:85101600-85121000 Weak transcription Placenta Placenta
19 chr1:85103000-85115000 Weak transcription HMEC breast
20 chr1:85104600-85116000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
21 chr1:85104800-85111600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
22 chr1:85105000-85119000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
23 chr1:85105800-85115000 Weak transcription Small Intestine intestine
24 chr1:85106000-85110800 Weak transcription Fetal Thymus thymus
25 chr1:85106000-85116600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr1:85106200-85108000 Weak transcription Fetal Intestine Large intestine
27 chr1:85106200-85108200 Weak transcription K562 blood
28 chr1:85106200-85112400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr1:85106200-85115000 Weak transcription Breast Myoepithelial Primary Cells Breast
30 chr1:85106200-85140400 Weak transcription NHEK skin
31 chr1:85106400-85114800 Weak transcription Fetal Brain Female brain
32 chr1:85106400-85155400 Weak transcription Sigmoid Colon Sigmoid Colon
33 chr1:85106600-85114800 Weak transcription Duodenum Mucosa Duodenum
34 chr1:85106600-85116800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr1:85107200-85110000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr1:85107200-85110000 Enhancers Fetal Intestine Small intestine
37 chr1:85107400-85110000 Enhancers Fetal Heart heart
38 chr1:85107600-85114800 Weak transcription Primary B cells from cord blood blood
39 chr1:85107600-85115000 Weak transcription Primary T cells from cord blood blood
40 chr1:85107800-85115400 Weak transcription Brain Cingulate Gyrus brain

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Last update: Aug 31, 2015