The 2.0 version of rSNPBase

Variant report

Variant rs34984409
Chromosome Location chr1:59216441-59216442
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:35 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:59206200-59221000 Weak transcription Fetal Intestine Small intestine
2 chr1:59207600-59220000 Weak transcription Placenta Amnion Placenta Amnion
3 chr1:59207800-59220000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr1:59207800-59220000 Weak transcription Psoas Muscle Psoas
5 chr1:59211600-59218200 Weak transcription NHDF-Ad bronchial
6 chr1:59211600-59221000 Weak transcription Stomach Mucosa stomach
7 chr1:59212000-59220000 Weak transcription Skeletal Muscle Female skeletal muscle
8 chr1:59212200-59218200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr1:59212600-59218800 Weak transcription NH-A brain
10 chr1:59212800-59218200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr1:59212800-59218600 Weak transcription HMEC breast
12 chr1:59212800-59218600 Weak transcription NHLF lung
13 chr1:59213000-59218400 Weak transcription Muscle Satellite Cultured Cells --
14 chr1:59214400-59218400 Enhancers HepG2 liver
15 chr1:59215000-59216800 Enhancers Primary T killer naive cells fromperipheralblood blood
16 chr1:59215000-59218800 Weak transcription Fetal Muscle Leg muscle
17 chr1:59215200-59218000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
18 chr1:59215200-59218400 Weak transcription Cortex derived primary cultured neurospheres brain
19 chr1:59215200-59218600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr1:59215200-59221200 Weak transcription Fetal Brain Female brain
21 chr1:59215200-59221200 Weak transcription Fetal Stomach stomach
22 chr1:59215400-59217800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr1:59215400-59218400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
24 chr1:59215400-59218400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr1:59215400-59218600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
26 chr1:59215400-59218600 Weak transcription Fetal Lung lung
27 chr1:59215400-59219800 Weak transcription Fetal Brain Male brain
28 chr1:59215400-59221000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
29 chr1:59215600-59216600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr1:59215600-59218200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
31 chr1:59215600-59218800 Weak transcription HUVEC blood vessel
32 chr1:59215800-59218400 Weak transcription NHEK skin
33 chr1:59215800-59218800 Weak transcription Brain Germinal Matrix brain
34 chr1:59216400-59217600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
35 chr1:59216400-59218200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin

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Last update: Aug 31, 2015