The 2.0 version of rSNPBase

Variant report

Variant rs35276196
Chromosome Location chr11:10654980-10654981
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:10629400-10663600 Weak transcription Fetal Intestine Large intestine
2 chr11:10629600-10662800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
3 chr11:10637800-10659200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
4 chr11:10639800-10661600 Weak transcription Gastric stomach
5 chr11:10640600-10661400 Weak transcription Left Ventricle heart
6 chr11:10644000-10659600 Weak transcription Osteobl bone
7 chr11:10646000-10661600 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr11:10646000-10679000 Weak transcription Fetal Lung lung
9 chr11:10646200-10661400 Weak transcription Duodenum Mucosa Duodenum
10 chr11:10646200-10679200 Weak transcription Rectal Mucosa Donor 29 rectum
11 chr11:10646400-10659400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
12 chr11:10646800-10667600 Weak transcription Right Atrium heart
13 chr11:10647200-10659000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
14 chr11:10647400-10659200 Weak transcription Brain Cingulate Gyrus brain
15 chr11:10647400-10659200 Weak transcription Brain Inferior Temporal Lobe brain
16 chr11:10647800-10656800 Strong transcription Aorta Aorta
17 chr11:10647800-10658000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr11:10648000-10658400 Weak transcription Brain Anterior Caudate brain
19 chr11:10648000-10659200 Weak transcription Colonic Mucosa Colon
20 chr11:10648000-10661200 Weak transcription Spleen Spleen
21 chr11:10648000-10661400 Weak transcription Adipose Nuclei Adipose
22 chr11:10648200-10658400 Weak transcription Brain Hippocampus Middle brain
23 chr11:10648200-10658600 Strong transcription Fetal Stomach stomach
24 chr11:10648400-10659000 Weak transcription Fetal Muscle Leg muscle
25 chr11:10649200-10655600 Strong transcription Stomach Smooth Muscle stomach
26 chr11:10650400-10663400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
27 chr11:10650400-10678600 Weak transcription Right Ventricle heart
28 chr11:10651000-10655000 Weak transcription Placenta Amnion Placenta Amnion
29 chr11:10651200-10656000 Weak transcription Rectal Smooth Muscle rectum
30 chr11:10651800-10670600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
31 chr11:10652400-10668200 Weak transcription NHLF lung
32 chr11:10653000-10655400 Strong transcription Duodenum Smooth Muscle Duodenum
33 chr11:10653000-10658800 Weak transcription Fetal Adrenal Gland Adrenal Gland
34 chr11:10653200-10668200 Weak transcription Esophagus oesophagus
35 chr11:10653400-10658800 Weak transcription Primary B cells from peripheral blood blood
36 chr11:10653600-10655000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
37 chr11:10653600-10657000 Weak transcription Ovary ovary
38 chr11:10653600-10663600 Weak transcription Lung lung
39 chr11:10653600-10669000 Weak transcription Fetal Intestine Small intestine
40 chr11:10654200-10655000 Weak transcription Placenta Placenta
41 chr11:10654400-10660800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr11:10654600-10655600 Weak transcription Breast Myoepithelial Primary Cells Breast
43 chr11:10654600-10658800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr11:10654800-10655200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
45 chr11:10654800-10658600 Weak transcription Colon Smooth Muscle Colon

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Last update: Aug 31, 2015