The 2.0 version of rSNPBase

Variant report

Variant rs3781806
Chromosome Location chr11:86220259-86220260
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:86160200-86221000 Weak transcription Primary T cells from cord blood blood
2 chr11:86172400-86227000 Weak transcription Brain Cingulate Gyrus brain
3 chr11:86189200-86222600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr11:86189600-86221600 Weak transcription Duodenum Smooth Muscle Duodenum
5 chr11:86195200-86222200 Weak transcription Rectal Smooth Muscle rectum
6 chr11:86198600-86222800 Weak transcription Esophagus oesophagus
7 chr11:86202800-86226400 Weak transcription Fetal Lung lung
8 chr11:86204000-86222200 Weak transcription Colon Smooth Muscle Colon
9 chr11:86209200-86221200 Weak transcription NH-A brain
10 chr11:86209200-86223600 Weak transcription Brain Angular Gyrus brain
11 chr11:86209200-86226600 Weak transcription Skeletal Muscle Male skeletal muscle
12 chr11:86209400-86221600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
13 chr11:86209400-86221600 Weak transcription HSMM muscle
14 chr11:86209600-86221800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr11:86211400-86222800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr11:86211600-86229800 Weak transcription Brain Anterior Caudate brain
17 chr11:86212800-86221600 Weak transcription K562 blood
18 chr11:86214800-86222000 Weak transcription Skeletal Muscle Female skeletal muscle
19 chr11:86215000-86229800 Weak transcription Lung lung
20 chr11:86215200-86221800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
21 chr11:86215200-86222400 Weak transcription Ovary ovary
22 chr11:86215200-86222600 Weak transcription Primary hematopoietic stem cells blood
23 chr11:86215200-86223400 Weak transcription Primary T killer naive cells fromperipheralblood blood
24 chr11:86215200-86226400 Weak transcription Spleen Spleen
25 chr11:86215400-86221000 Weak transcription Fetal Adrenal Gland Adrenal Gland
26 chr11:86215400-86222400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
27 chr11:86215400-86222400 Weak transcription Right Ventricle heart
28 chr11:86215400-86223400 Weak transcription Fetal Kidney kidney
29 chr11:86215400-86225000 Weak transcription Psoas Muscle Psoas
30 chr11:86215800-86230000 Weak transcription Fetal Muscle Trunk muscle
31 chr11:86216000-86222600 Weak transcription Primary T killer memory cells from peripheral blood blood
32 chr11:86216800-86222800 Enhancers Fetal Intestine Large intestine
33 chr11:86217200-86221400 Weak transcription Breast Myoepithelial Primary Cells Breast
34 chr11:86217200-86223000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
35 chr11:86217600-86226600 Weak transcription Aorta Aorta
36 chr11:86218000-86221200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr11:86218000-86228000 Weak transcription Fetal Brain Female brain
38 chr11:86218200-86227800 Weak transcription Fetal Brain Male brain
39 chr11:86218600-86222000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
40 chr11:86218600-86225200 Enhancers Rectal Mucosa Donor 31 rectum
41 chr11:86218600-86226400 Weak transcription Fetal Stomach stomach
42 chr11:86218600-86227800 Weak transcription Stomach Smooth Muscle stomach
43 chr11:86218600-86229600 Weak transcription Brain Germinal Matrix brain
44 chr11:86219000-86222200 Enhancers Fetal Intestine Small intestine
45 chr11:86219000-86222800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr11:86219200-86220800 Enhancers Hela-S3 cervix
47 chr11:86219200-86221400 Enhancers Liver Liver
48 chr11:86219200-86222400 Enhancers HepG2 liver
49 chr11:86219200-86222800 Enhancers HMEC breast
50 chr11:86219200-86223000 Enhancers Muscle Satellite Cultured Cells --

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Last update: Aug 31, 2015