The 2.0 version of rSNPBase

Variant report

Variant rs66872826
Chromosome Location chr11:86221760-86221761
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:86172400-86227000 Weak transcription Brain Cingulate Gyrus brain
2 chr11:86189200-86222600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
3 chr11:86195200-86222200 Weak transcription Rectal Smooth Muscle rectum
4 chr11:86198600-86222800 Weak transcription Esophagus oesophagus
5 chr11:86202800-86226400 Weak transcription Fetal Lung lung
6 chr11:86204000-86222200 Weak transcription Colon Smooth Muscle Colon
7 chr11:86209200-86223600 Weak transcription Brain Angular Gyrus brain
8 chr11:86209200-86226600 Weak transcription Skeletal Muscle Male skeletal muscle
9 chr11:86209600-86221800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr11:86211400-86222800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr11:86211600-86229800 Weak transcription Brain Anterior Caudate brain
12 chr11:86214800-86222000 Weak transcription Skeletal Muscle Female skeletal muscle
13 chr11:86215000-86229800 Weak transcription Lung lung
14 chr11:86215200-86221800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
15 chr11:86215200-86222400 Weak transcription Ovary ovary
16 chr11:86215200-86222600 Weak transcription Primary hematopoietic stem cells blood
17 chr11:86215200-86223400 Weak transcription Primary T killer naive cells fromperipheralblood blood
18 chr11:86215200-86226400 Weak transcription Spleen Spleen
19 chr11:86215400-86222400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
20 chr11:86215400-86222400 Weak transcription Right Ventricle heart
21 chr11:86215400-86223400 Weak transcription Fetal Kidney kidney
22 chr11:86215400-86225000 Weak transcription Psoas Muscle Psoas
23 chr11:86215800-86230000 Weak transcription Fetal Muscle Trunk muscle
24 chr11:86216000-86222600 Weak transcription Primary T killer memory cells from peripheral blood blood
25 chr11:86216800-86222800 Enhancers Fetal Intestine Large intestine
26 chr11:86217200-86223000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
27 chr11:86217600-86226600 Weak transcription Aorta Aorta
28 chr11:86218000-86228000 Weak transcription Fetal Brain Female brain
29 chr11:86218200-86227800 Weak transcription Fetal Brain Male brain
30 chr11:86218600-86222000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
31 chr11:86218600-86225200 Enhancers Rectal Mucosa Donor 31 rectum
32 chr11:86218600-86226400 Weak transcription Fetal Stomach stomach
33 chr11:86218600-86227800 Weak transcription Stomach Smooth Muscle stomach
34 chr11:86218600-86229600 Weak transcription Brain Germinal Matrix brain
35 chr11:86219000-86222200 Enhancers Fetal Intestine Small intestine
36 chr11:86219000-86222800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr11:86219200-86222400 Enhancers HepG2 liver
38 chr11:86219200-86222800 Enhancers HMEC breast
39 chr11:86219200-86223000 Enhancers Muscle Satellite Cultured Cells --
40 chr11:86219200-86223200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr11:86219400-86223200 Enhancers Osteobl bone
42 chr11:86219600-86222800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr11:86219600-86222800 Enhancers NHDF-Ad bronchial
44 chr11:86220000-86230600 Weak transcription Brain Inferior Temporal Lobe brain
45 chr11:86220200-86221800 Weak transcription NHEK skin
46 chr11:86220200-86222400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr11:86220200-86225600 Enhancers Stomach Mucosa stomach
48 chr11:86220400-86222000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
49 chr11:86220400-86222400 Weak transcription Gastric stomach
50 chr11:86220400-86226600 Weak transcription Left Ventricle heart

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Last update: Aug 31, 2015