The 2.0 version of rSNPBase

Variant report

Variant rs41410
Chromosome Location chr2:72409433-72409434
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:72393600-72414800 Weak transcription NHEK skin
2 chr2:72394400-72409800 Weak transcription A549 lung
3 chr2:72400800-72414000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
4 chr2:72401200-72409600 Weak transcription Spleen Spleen
5 chr2:72401600-72411600 Weak transcription H1 Cell Line embryonic stem cell
6 chr2:72401600-72414000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
7 chr2:72401600-72415200 Weak transcription H9 Cell Line embryonic stem cell
8 chr2:72402000-72410400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
9 chr2:72402200-72410400 Weak transcription Psoas Muscle Psoas
10 chr2:72402200-72412200 Weak transcription Primary T helper naive cells fromperipheralblood blood
11 chr2:72402600-72410400 Weak transcription Small Intestine intestine
12 chr2:72403000-72410200 Weak transcription Fetal Kidney kidney
13 chr2:72403400-72414200 Weak transcription Cortex derived primary cultured neurospheres brain
14 chr2:72405400-72409600 Weak transcription Pancreas Pancrea
15 chr2:72405400-72414000 Weak transcription Fetal Intestine Small intestine
16 chr2:72405600-72411200 Weak transcription HSMMtube muscle
17 chr2:72405600-72414000 Weak transcription Lung lung
18 chr2:72405800-72418600 Weak transcription Brain Angular Gyrus brain
19 chr2:72406000-72412400 Weak transcription Liver Liver
20 chr2:72406200-72409800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr2:72406200-72412200 Weak transcription Fetal Heart heart
22 chr2:72406400-72410200 Weak transcription Fetal Muscle Leg muscle
23 chr2:72406400-72410400 Weak transcription Fetal Intestine Large intestine
24 chr2:72406400-72412000 Weak transcription Duodenum Smooth Muscle Duodenum
25 chr2:72406400-72425800 Weak transcription Brain Anterior Caudate brain
26 chr2:72406600-72409600 Weak transcription Ovary ovary
27 chr2:72406600-72410400 Weak transcription Esophagus oesophagus
28 chr2:72406600-72411800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
29 chr2:72406600-72412400 Weak transcription Gastric stomach
30 chr2:72406600-72414000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
31 chr2:72406600-72414000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
32 chr2:72406600-72414000 Weak transcription Placenta Placenta
33 chr2:72406600-72414200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
34 chr2:72406600-72414600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
35 chr2:72406600-72415800 Weak transcription Placenta Amnion Placenta Amnion
36 chr2:72406800-72409800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr2:72406800-72410800 Weak transcription Sigmoid Colon Sigmoid Colon
38 chr2:72406800-72414000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr2:72406800-72414400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr2:72406800-72418600 Weak transcription Brain Cingulate Gyrus brain
41 chr2:72406800-72419800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr2:72407000-72412200 Weak transcription Brain Substantia Nigra brain
43 chr2:72407000-72412200 Weak transcription Fetal Lung lung
44 chr2:72407000-72412400 Weak transcription Brain Hippocampus Middle brain
45 chr2:72407000-72412600 Weak transcription Fetal Muscle Trunk muscle
46 chr2:72407000-72414400 Weak transcription Fetal Adrenal Gland Adrenal Gland
47 chr2:72407000-72414600 Weak transcription Brain Germinal Matrix brain
48 chr2:72407000-72415000 Weak transcription Skeletal Muscle Male skeletal muscle
49 chr2:72407200-72409600 Weak transcription Adipose Nuclei Adipose
50 chr2:72407200-72412400 Weak transcription Aorta Aorta

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Last update: Aug 31, 2015