Variant report

Variant rs4151433
Chromosome Location chr13:48893106-48893107
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:48879400-48894200 Weak transcription A549 lung
2 chr13:48880200-48893800 Weak transcription Brain Inferior Temporal Lobe brain
3 chr13:48880200-48894400 Weak transcription Brain Anterior Caudate brain
4 chr13:48880200-48913200 Weak transcription Aorta Aorta
5 chr13:48880600-48894600 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr13:48880600-48924600 Weak transcription Psoas Muscle Psoas
7 chr13:48880800-48893200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
8 chr13:48880800-48895200 Weak transcription Small Intestine intestine
9 chr13:48880800-48895600 Weak transcription Hela-S3 cervix
10 chr13:48880800-48896200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
11 chr13:48881200-48895600 Weak transcription HepG2 liver
12 chr13:48884400-48893400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
13 chr13:48887000-48896200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr13:48890000-48894200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr13:48890000-48894400 ZNF genes & repeats GM12878-XiMat blood
16 chr13:48890000-48894800 ZNF genes & repeats Fetal Intestine Large intestine
17 chr13:48890200-48894200 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr13:48890200-48895000 ZNF genes & repeats Fetal Stomach stomach
19 chr13:48890200-48896000 ZNF genes & repeats Fetal Adrenal Gland Adrenal Gland
20 chr13:48890600-48893600 Strong transcription NHLF lung
21 chr13:48890600-48895000 Weak transcription Right Atrium heart
22 chr13:48890600-48895400 ZNF genes & repeats Foreskin Fibroblast Primary Cells skin01 Skin
23 chr13:48890800-48893200 Genic enhancers Spleen Spleen
24 chr13:48890800-48894200 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr13:48890800-48896800 ZNF genes & repeats Dnd41 blood
26 chr13:48891000-48893600 ZNF genes & repeats Esophagus oesophagus
27 chr13:48891000-48893800 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr13:48891000-48895000 ZNF genes & repeats Brain Germinal Matrix brain
29 chr13:48891000-48895400 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
30 chr13:48891000-48896800 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
31 chr13:48891200-48893800 Weak transcription HUES6 Cell Line embryonic stem cell
32 chr13:48891200-48894800 ZNF genes & repeats Placenta Placenta
33 chr13:48891200-48896200 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
34 chr13:48891400-48894800 Strong transcription Muscle Satellite Cultured Cells --
35 chr13:48891400-48896000 ZNF genes & repeats Thymus Thymus
36 chr13:48891600-48896000 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin01 Skin
37 chr13:48891800-48894400 ZNF genes & repeats Colonic Mucosa Colon
38 chr13:48891800-48894600 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
39 chr13:48891800-48894600 Strong transcription Osteobl bone
40 chr13:48891800-48896000 Weak transcription iPS-15b Cell Line embryonic stem cell
41 chr13:48892000-48893600 Active TSS Left Ventricle heart
42 chr13:48892000-48893800 Flanking Bivalent TSS/Enh Primary monocytes fromperipheralblood blood
43 chr13:48892000-48894200 Flanking Bivalent TSS/Enh Fetal Thymus thymus
44 chr13:48892000-48894400 Flanking Active TSS Primary T cells fromperipheralblood blood
45 chr13:48892000-48894600 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
46 chr13:48892000-48895200 Enhancers Fetal Heart heart
47 chr13:48892000-48895200 Strong transcription HSMMtube muscle
48 chr13:48892200-48893200 Transcr. at gene 5' and 3' Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr13:48892200-48893400 Active TSS Skeletal Muscle Female skeletal muscle
50 chr13:48892200-48893600 Flanking Bivalent TSS/Enh Primary neutrophils fromperipheralblood blood

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