Variant report

Variant rs4151436
Chromosome Location chr13:48894289-48894290
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:48880200-48894400 Weak transcription Brain Anterior Caudate brain
2 chr13:48880200-48913200 Weak transcription Aorta Aorta
3 chr13:48880600-48894600 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr13:48880600-48924600 Weak transcription Psoas Muscle Psoas
5 chr13:48880800-48895200 Weak transcription Small Intestine intestine
6 chr13:48880800-48895600 Weak transcription Hela-S3 cervix
7 chr13:48880800-48896200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
8 chr13:48881200-48895600 Weak transcription HepG2 liver
9 chr13:48887000-48896200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr13:48890000-48894400 ZNF genes & repeats GM12878-XiMat blood
11 chr13:48890000-48894800 ZNF genes & repeats Fetal Intestine Large intestine
12 chr13:48890200-48895000 ZNF genes & repeats Fetal Stomach stomach
13 chr13:48890200-48896000 ZNF genes & repeats Fetal Adrenal Gland Adrenal Gland
14 chr13:48890600-48895000 Weak transcription Right Atrium heart
15 chr13:48890600-48895400 ZNF genes & repeats Foreskin Fibroblast Primary Cells skin01 Skin
16 chr13:48890800-48896800 ZNF genes & repeats Dnd41 blood
17 chr13:48891000-48895000 ZNF genes & repeats Brain Germinal Matrix brain
18 chr13:48891000-48895400 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
19 chr13:48891000-48896800 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
20 chr13:48891200-48894800 ZNF genes & repeats Placenta Placenta
21 chr13:48891200-48896200 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
22 chr13:48891400-48894800 Strong transcription Muscle Satellite Cultured Cells --
23 chr13:48891400-48896000 ZNF genes & repeats Thymus Thymus
24 chr13:48891600-48896000 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin01 Skin
25 chr13:48891800-48894400 ZNF genes & repeats Colonic Mucosa Colon
26 chr13:48891800-48894600 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
27 chr13:48891800-48894600 Strong transcription Osteobl bone
28 chr13:48891800-48896000 Weak transcription iPS-15b Cell Line embryonic stem cell
29 chr13:48892000-48894400 Flanking Active TSS Primary T cells fromperipheralblood blood
30 chr13:48892000-48894600 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
31 chr13:48892000-48895200 Enhancers Fetal Heart heart
32 chr13:48892000-48895200 Strong transcription HSMMtube muscle
33 chr13:48892200-48894800 ZNF genes & repeats Lung lung
34 chr13:48892200-48895400 Active TSS Rectal Smooth Muscle rectum
35 chr13:48892200-48895400 Flanking Bivalent TSS/Enh Monocytes-CD14+_RO01746 blood
36 chr13:48892200-48896000 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr13:48892200-48897000 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
38 chr13:48892400-48894400 Transcr. at gene 5' and 3' Primary mononuclear cells fromperipheralblood Blood
39 chr13:48892400-48894400 Active TSS Duodenum Smooth Muscle Duodenum
40 chr13:48892400-48894400 ZNF genes & repeats HSMM muscle
41 chr13:48892400-48895000 Bivalent Enhancer Fetal Brain Male brain
42 chr13:48892400-48895200 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
43 chr13:48892400-48895400 ZNF genes & repeats HMEC breast
44 chr13:48892400-48895800 Active TSS Rectal Mucosa Donor 29 rectum
45 chr13:48892400-48896000 Active TSS Rectal Mucosa Donor 31 rectum
46 chr13:48892600-48894600 Transcr. at gene 5' and 3' Adipose Nuclei Adipose
47 chr13:48892600-48895400 Active TSS Primary T helper naive cells from peripheral blood blood
48 chr13:48892600-48895400 ZNF genes & repeats Fetal Intestine Small intestine
49 chr13:48892600-48927800 Weak transcription HUVEC blood vessel
50 chr13:48892800-48894600 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived

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