Variant report

Variant	rs4367296
Chromosome Location	chr5:124231696-124231697
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs10041789	0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10051781	0.87[ASN][1000 genomes]
rs10058773	0.89[EUR][1000 genomes]
rs10065037	0.88[ASN][1000 genomes]
rs10077640	0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1078675	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11241774	0.89[EUR][1000 genomes]
rs13362134	0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4434376	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4527598	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6595557	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6880908	0.88[ASN][1000 genomes]
rs6881675	0.88[ASN][1000 genomes]
rs753671	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7718357	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7721141	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs960833	0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:124223200-124242200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr5:124225400-124233200	Weak transcription	H9 Cell Line	embryonic stem cell
3	chr5:124225600-124233000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr5:124225800-124237800	Weak transcription	Fetal Lung	lung
5	chr5:124229000-124233000	Weak transcription	H1 Cell Line	embryonic stem cell
6	chr5:124230400-124231800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
7	chr5:124230600-124233000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr5:124230800-124233000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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