Variant report

Variant	rs10065037
Chromosome Location	chr5:124238807-124238808
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10041789	0.99[ASN][1000 genomes]
rs10051781	0.88[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10077640	0.80[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs1078675	0.84[ASN][1000 genomes]
rs12514161	0.81[ASN][1000 genomes]
rs13362134	0.99[ASN][1000 genomes]
rs2408225	0.81[ASN][1000 genomes]
rs4367296	0.88[ASN][1000 genomes]
rs4434376	0.84[ASN][1000 genomes]
rs4527598	0.89[ASN][1000 genomes]
rs6595557	0.89[ASN][1000 genomes]
rs6876107	0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6880908	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6881675	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6886725	0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs753671	0.85[ASN][1000 genomes]
rs7718357	0.82[ASN][1000 genomes]
rs7721141	1.00[ASN][1000 genomes]
rs960833	0.99[ASN][1000 genomes]

No data

Chromatin state (count:72 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:124223200-124242200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr5:124235200-124242000	Weak transcription	NHDF-Ad	bronchial
3	chr5:124236600-124240000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr5:124236800-124240200	Enhancers	Cortex derived primary cultured neurospheres	brain
5	chr5:124237000-124243400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr5:124237200-124240000	Enhancers	Dnd41	blood
7	chr5:124237400-124239000	Enhancers	Primary hematopoietic stem cells short term culture	blood
8	chr5:124237400-124239400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
9	chr5:124237400-124239600	Enhancers	Primary B cells from cord blood	blood
10	chr5:124237600-124239000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
11	chr5:124237600-124239400	Enhancers	Primary monocytes fromperipheralblood	blood
12	chr5:124237600-124239600	Enhancers	Primary B cells from peripheral blood	blood
13	chr5:124237600-124243000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
14	chr5:124237600-124246800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
15	chr5:124237800-124239800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
16	chr5:124238200-124241600	Weak transcription	Colon Smooth Muscle	Colon
17	chr5:124238200-124241600	Weak transcription	HSMM	muscle
18	chr5:124238200-124241800	Weak transcription	Primary neutrophils fromperipheralblood	blood
19	chr5:124238200-124241800	Weak transcription	Hela-S3	cervix
20	chr5:124238200-124242000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
21	chr5:124238200-124242200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
22	chr5:124238400-124239600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
23	chr5:124238400-124240800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
24	chr5:124238400-124240800	Weak transcription	Brain Anterior Caudate	brain
25	chr5:124238400-124240800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
26	chr5:124238400-124241400	Weak transcription	Brain Germinal Matrix	brain
27	chr5:124238400-124241600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
28	chr5:124238400-124241600	Weak transcription	Duodenum Smooth Muscle	Duodenum
29	chr5:124238400-124241600	Weak transcription	Fetal Stomach	stomach
30	chr5:124238400-124241800	Weak transcription	Adipose Nuclei	Adipose
31	chr5:124238400-124242000	Weak transcription	Fetal Intestine Small	intestine
32	chr5:124238400-124242000	Weak transcription	Fetal Thymus	thymus
33	chr5:124238400-124242000	Weak transcription	Left Ventricle	heart
34	chr5:124238400-124242000	Weak transcription	Rectal Mucosa Donor 29	rectum
35	chr5:124238400-124242000	Weak transcription	Right Ventricle	heart
36	chr5:124238400-124242000	Weak transcription	Sigmoid Colon	Sigmoid Colon
37	chr5:124238400-124242000	Weak transcription	HUVEC	blood vessel
38	chr5:124238400-124242000	Weak transcription	NHLF	lung
39	chr5:124238400-124242200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
40	chr5:124238400-124242200	Weak transcription	Esophagus	oesophagus
41	chr5:124238400-124242200	Weak transcription	Pancreas	Pancrea
42	chr5:124238400-124242200	Weak transcription	Psoas Muscle	Psoas
43	chr5:124238400-124242200	Weak transcription	Right Atrium	heart
44	chr5:124238400-124246200	Weak transcription	Aorta	Aorta
45	chr5:124238600-124239400	Bivalent Enhancer	iPS-18 Cell Line	embryonic stem cell
46	chr5:124238600-124239400	Enhancers	Monocytes-CD14+_RO01746	blood
47	chr5:124238600-124240600	Weak transcription	Fetal Kidney	kidney
48	chr5:124238600-124240600	Weak transcription	Skeletal Muscle Male	skeletal muscle
49	chr5:124238600-124240800	Weak transcription	Brain Hippocampus Middle	brain
50	chr5:124238600-124240800	Weak transcription	Skeletal Muscle Female	skeletal muscle

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