Variant report

Variant	rs4452660
Chromosome Location	chr6:147276458-147276459
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:147223899..147226748-chr6:147275966..147278820,2	K562	blood:
2	chr6:147276025..147277769-chr6:147278836..147281126,2	K562	blood:

Extended variants
information (count: 43 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:43)

rs_ID	r²[population]
rs11155492	1.00[CEU][hapmap];0.95[CHB][hapmap];0.82[YRI][hapmap];0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11155493	0.86[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs11155494	0.95[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12199143	0.83[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs12203394	0.82[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs1408577	0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1529013	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs1529014	0.83[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1529021	0.83[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1881662	0.85[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2181942	0.84[AMR][1000 genomes]
rs2328774	0.83[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs34746293	0.83[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs4267966	0.93[EUR][1000 genomes]
rs4323329	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4431452	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4445078	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4551178	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs4605904	0.83[AMR][1000 genomes]
rs4609047	0.84[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs4895706	1.00[CEU][hapmap];0.95[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs4896897	0.85[AMR][1000 genomes]
rs6911913	0.83[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs6913861	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6936461	0.81[AMR][1000 genomes]
rs6936487	0.81[AMR][1000 genomes]
rs7742886	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs7774249	0.82[AMR][1000 genomes]
rs7774926	0.82[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs9322081	0.85[AMR][1000 genomes]
rs9322082	1.00[CEU][hapmap];0.85[CHB][hapmap];0.87[JPT][hapmap];0.97[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9373518	0.81[AMR][1000 genomes]
rs9377038	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9386176	0.89[EUR][1000 genomes]
rs9390445	0.83[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs9399592	0.93[CEU][hapmap];0.89[EUR][1000 genomes]
rs9403832	0.93[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs9403834	0.95[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs9497671	0.82[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs9497672	0.83[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs9497673	0.82[AMR][1000 genomes]
rs9497674	0.82[AMR][1000 genomes]
rs9766272	0.83[AMR][1000 genomes];0.80[EUR][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:147265600-147276600	Weak transcription	Pancreas	Pancrea
2	chr6:147268800-147277800	Weak transcription	Pancreatic Islets	Pancreatic Islet
3	chr6:147272000-147277000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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