The 2.0 version of rSNPBase

Variant report

Variant rs45509591
Chromosome Location chr2:11907842-11907843
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:11888400-11916400 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr2:11895000-11918200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
3 chr2:11897600-11909000 Weak transcription Psoas Muscle Psoas
4 chr2:11899200-11911200 Weak transcription Small Intestine intestine
5 chr2:11900600-11908800 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr2:11900600-11918000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
7 chr2:11900800-11912200 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
8 chr2:11901200-11909000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr2:11901200-11915000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr2:11901600-11914200 Weak transcription iPS-18 Cell Line embryonic stem cell
11 chr2:11901800-11914000 Strong transcription Primary T regulatory cells fromperipheralblood blood
12 chr2:11901800-11918600 Strong transcription Fetal Adrenal Gland Adrenal Gland
13 chr2:11902200-11913800 Strong transcription NHLF lung
14 chr2:11902800-11912200 Strong transcription Breast Myoepithelial Primary Cells Breast
15 chr2:11902800-11912400 Strong transcription Primary B cells from peripheral blood blood
16 chr2:11902800-11913800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
17 chr2:11903000-11908400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
18 chr2:11903000-11913600 Strong transcription Primary T helper cells fromperipheralblood blood
19 chr2:11903000-11914200 Strong transcription Primary T helper cells PMA-I stimulated --
20 chr2:11903000-11915000 Strong transcription NHEK skin
21 chr2:11903200-11915000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
22 chr2:11903400-11914600 Strong transcription Dnd41 blood
23 chr2:11903600-11911600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr2:11903800-11908600 Strong transcription HMEC breast
25 chr2:11903800-11913800 Weak transcription HUES48 Cell Line embryonic stem cell
26 chr2:11903800-11914800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
27 chr2:11904000-11914600 Strong transcription Primary T helper naive cells fromperipheralblood blood
28 chr2:11904400-11914800 Strong transcription Primary B cells from cord blood blood
29 chr2:11904400-11914800 Strong transcription Primary T cells from cord blood blood
30 chr2:11904600-11908200 Strong transcription Fetal Muscle Trunk muscle
31 chr2:11904600-11908600 Strong transcription Muscle Satellite Cultured Cells --
32 chr2:11904600-11909000 Strong transcription Esophagus oesophagus
33 chr2:11904600-11909200 Strong transcription Fetal Brain Female brain
34 chr2:11904600-11909200 Strong transcription Fetal Intestine Small intestine
35 chr2:11904800-11908400 Strong transcription A549 lung
36 chr2:11905000-11908200 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
37 chr2:11905000-11908400 Strong transcription GM12878-XiMat blood
38 chr2:11905000-11908600 Strong transcription HepG2 liver
39 chr2:11905000-11909000 Strong transcription Fetal Stomach stomach
40 chr2:11905000-11914200 Strong transcription Primary T helper 17 cells PMA-I stimulated --
41 chr2:11905000-11915400 Strong transcription Monocytes-CD14+_RO01746 blood
42 chr2:11905200-11908200 Strong transcription Lung lung
43 chr2:11905200-11908200 Strong transcription Rectal Smooth Muscle rectum
44 chr2:11905200-11908200 Strong transcription Thymus Thymus
45 chr2:11905200-11908800 Strong transcription Fetal Muscle Leg muscle
46 chr2:11905200-11912600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr2:11905200-11915000 Strong transcription Sigmoid Colon Sigmoid Colon
48 chr2:11905200-11919000 Weak transcription Stomach Mucosa stomach
49 chr2:11905400-11908000 Weak transcription Right Atrium heart
50 chr2:11905400-11908200 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived

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Last update: Aug 31, 2015