The 2.0 version of rSNPBase

Variant report

Variant rs6726960
Chromosome Location chr2:11898931-11898932
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:106 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:11888400-11916400 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr2:11890400-11906400 Weak transcription Fetal Brain Male brain
3 chr2:11890600-11905800 Weak transcription Placenta Amnion Placenta Amnion
4 chr2:11891400-11903000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr2:11893800-11906400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
6 chr2:11894200-11903000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr2:11894400-11899000 Weak transcription Placenta Placenta
8 chr2:11894600-11899200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
9 chr2:11894600-11899400 Enhancers Primary B cells from peripheral blood blood
10 chr2:11894600-11899400 Enhancers Primary hematopoietic stem cells blood
11 chr2:11894600-11904600 Weak transcription Fetal Intestine Small intestine
12 chr2:11894800-11899200 Enhancers Primary T cells fromperipheralblood blood
13 chr2:11894800-11899200 Enhancers Primary T helper cells fromperipheralblood blood
14 chr2:11894800-11899400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr2:11894800-11903000 Weak transcription Aorta Aorta
16 chr2:11894800-11903200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr2:11895000-11899000 Enhancers Primary T killer memory cells from peripheral blood blood
18 chr2:11895000-11899200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
19 chr2:11895000-11899200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr2:11895000-11901000 Weak transcription A549 lung
21 chr2:11895000-11901400 Weak transcription Brain Anterior Caudate brain
22 chr2:11895000-11902000 Weak transcription Left Ventricle heart
23 chr2:11895000-11902200 Weak transcription NHLF lung
24 chr2:11895000-11902600 Weak transcription Right Ventricle heart
25 chr2:11895000-11903000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
26 chr2:11895000-11903000 Weak transcription Brain Inferior Temporal Lobe brain
27 chr2:11895000-11903000 Weak transcription Esophagus oesophagus
28 chr2:11895000-11903000 Weak transcription Fetal Stomach stomach
29 chr2:11895000-11903000 Weak transcription Stomach Smooth Muscle stomach
30 chr2:11895000-11903200 Weak transcription Fetal Muscle Leg muscle
31 chr2:11895000-11903400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
32 chr2:11895000-11903600 Weak transcription Liver Liver
33 chr2:11895000-11904400 Weak transcription Adipose Nuclei Adipose
34 chr2:11895000-11904400 Weak transcription Brain Cingulate Gyrus brain
35 chr2:11895000-11904400 Weak transcription Duodenum Smooth Muscle Duodenum
36 chr2:11895000-11904600 Weak transcription Muscle Satellite Cultured Cells --
37 chr2:11895000-11904600 Weak transcription Rectal Smooth Muscle rectum
38 chr2:11895000-11904600 Weak transcription Hela-S3 cervix
39 chr2:11895000-11905000 Weak transcription Gastric stomach
40 chr2:11895000-11905400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr2:11895000-11905800 Weak transcription Brain Angular Gyrus brain
42 chr2:11895000-11905800 Weak transcription HSMMtube muscle
43 chr2:11895000-11905800 Weak transcription NH-A brain
44 chr2:11895000-11905800 Weak transcription Osteobl bone
45 chr2:11895000-11906000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr2:11895000-11906200 Weak transcription HSMM muscle
47 chr2:11895000-11907000 Weak transcription Colon Smooth Muscle Colon
48 chr2:11895000-11918200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr2:11895200-11901200 Weak transcription Rectal Mucosa Donor 29 rectum
50 chr2:11895200-11903800 Weak transcription HMEC breast

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Last update: Aug 31, 2015