The 2.0 version of rSNPBase

Variant report

Variant rs62114967
Chromosome Location chr2:11948765-11948766
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:11916800-11961200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
2 chr2:11919400-11961800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
3 chr2:11919600-11968400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr2:11919800-11949000 Strong transcription Primary T helper naive cells fromperipheralblood blood
5 chr2:11919800-11957600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
6 chr2:11919800-11957800 Strong transcription Primary T cells from cord blood blood
7 chr2:11919800-11959200 Strong transcription Liver Liver
8 chr2:11919800-11960400 Weak transcription Stomach Mucosa stomach
9 chr2:11919800-11963200 Strong transcription Primary B cells from peripheral blood blood
10 chr2:11919800-11967600 Strong transcription Primary T helper cells fromperipheralblood blood
11 chr2:11919800-11968400 Strong transcription Primary hematopoietic stem cells short term culture blood
12 chr2:11919800-11968800 Strong transcription Primary T regulatory cells fromperipheralblood blood
13 chr2:11925200-11949400 Strong transcription Duodenum Mucosa Duodenum
14 chr2:11925200-11964800 Strong transcription Breast Myoepithelial Primary Cells Breast
15 chr2:11925200-11968600 Strong transcription NHLF lung
16 chr2:11925800-11968600 Strong transcription Primary T cells fromperipheralblood blood
17 chr2:11928400-11948800 Strong transcription HUVEC blood vessel
18 chr2:11929800-11951200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
19 chr2:11929800-11955200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
20 chr2:11932400-11959600 Weak transcription Fetal Kidney kidney
21 chr2:11936800-11957600 Strong transcription Adipose Nuclei Adipose
22 chr2:11936800-11958000 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
23 chr2:11937000-11968800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr2:11937600-11957600 Weak transcription iPS-15b Cell Line embryonic stem cell
25 chr2:11939400-11948800 Strong transcription K562 blood
26 chr2:11941200-11956200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr2:11941200-11968600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr2:11941600-11953000 Strong transcription HMEC breast
29 chr2:11941800-11951800 Strong transcription Monocytes-CD14+_RO01746 blood
30 chr2:11942000-11949400 Strong transcription Primary T helper naive cells from peripheral blood blood
31 chr2:11942000-11958200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
32 chr2:11942200-11948800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
33 chr2:11942200-11953000 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
34 chr2:11942400-11949400 Strong transcription Stomach Smooth Muscle stomach
35 chr2:11942400-11951200 Strong transcription Brain Hippocampus Middle brain
36 chr2:11942400-11953400 Strong transcription Fetal Brain Female brain
37 chr2:11942600-11948800 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
38 chr2:11942600-11949000 Strong transcription Fetal Muscle Leg muscle
39 chr2:11942600-11957600 Strong transcription Fetal Stomach stomach
40 chr2:11942800-11948800 Strong transcription HUES6 Cell Line embryonic stem cell
41 chr2:11942800-11950000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
42 chr2:11942800-11960400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr2:11943000-11948800 Strong transcription Brain Substantia Nigra brain
44 chr2:11943000-11962800 Strong transcription NHEK skin
45 chr2:11943200-11950600 Strong transcription NHDF-Ad bronchial
46 chr2:11943400-11951200 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
47 chr2:11944000-11953600 Strong transcription Brain Anterior Caudate brain
48 chr2:11944400-11948800 Strong transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr2:11944800-11965400 Weak transcription Pancreatic Islets Pancreatic Islet
50 chr2:11946000-11949000 Genic enhancers Skeletal Muscle Male skeletal muscle

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Last update: Aug 31, 2015