The 2.0 version of rSNPBase

Variant report

Variant rs62113310
Chromosome Location chr2:11897612-11897613
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:106 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:11888400-11916400 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr2:11890400-11906400 Weak transcription Fetal Brain Male brain
3 chr2:11890600-11898600 Weak transcription HepG2 liver
4 chr2:11890600-11905800 Weak transcription Placenta Amnion Placenta Amnion
5 chr2:11891400-11903000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr2:11893800-11906400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
7 chr2:11894200-11903000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
8 chr2:11894400-11898200 Enhancers Skeletal Muscle Female skeletal muscle
9 chr2:11894400-11899000 Weak transcription Placenta Placenta
10 chr2:11894600-11898800 Weak transcription Fetal Heart heart
11 chr2:11894600-11899200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
12 chr2:11894600-11899400 Enhancers Primary B cells from peripheral blood blood
13 chr2:11894600-11899400 Enhancers Primary hematopoietic stem cells blood
14 chr2:11894600-11904600 Weak transcription Fetal Intestine Small intestine
15 chr2:11894800-11897800 Enhancers Primary B cells from cord blood blood
16 chr2:11894800-11898200 Enhancers Primary hematopoietic stem cells short term culture blood
17 chr2:11894800-11899200 Enhancers Primary T cells fromperipheralblood blood
18 chr2:11894800-11899200 Enhancers Primary T helper cells fromperipheralblood blood
19 chr2:11894800-11899400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr2:11894800-11903000 Weak transcription Aorta Aorta
21 chr2:11894800-11903200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr2:11895000-11897800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr2:11895000-11898000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr2:11895000-11898000 Weak transcription HUES6 Cell Line embryonic stem cell
25 chr2:11895000-11898200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr2:11895000-11898800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr2:11895000-11898800 Weak transcription Fetal Adrenal Gland Adrenal Gland
28 chr2:11895000-11898800 Weak transcription Ovary ovary
29 chr2:11895000-11899000 Enhancers Primary T killer memory cells from peripheral blood blood
30 chr2:11895000-11899200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
31 chr2:11895000-11899200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr2:11895000-11901000 Weak transcription A549 lung
33 chr2:11895000-11901400 Weak transcription Brain Anterior Caudate brain
34 chr2:11895000-11902000 Weak transcription Left Ventricle heart
35 chr2:11895000-11902200 Weak transcription NHLF lung
36 chr2:11895000-11902600 Weak transcription Right Ventricle heart
37 chr2:11895000-11903000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
38 chr2:11895000-11903000 Weak transcription Brain Inferior Temporal Lobe brain
39 chr2:11895000-11903000 Weak transcription Esophagus oesophagus
40 chr2:11895000-11903000 Weak transcription Fetal Stomach stomach
41 chr2:11895000-11903000 Weak transcription Stomach Smooth Muscle stomach
42 chr2:11895000-11903200 Weak transcription Fetal Muscle Leg muscle
43 chr2:11895000-11903400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
44 chr2:11895000-11903600 Weak transcription Liver Liver
45 chr2:11895000-11904400 Weak transcription Adipose Nuclei Adipose
46 chr2:11895000-11904400 Weak transcription Brain Cingulate Gyrus brain
47 chr2:11895000-11904400 Weak transcription Duodenum Smooth Muscle Duodenum
48 chr2:11895000-11904600 Weak transcription Muscle Satellite Cultured Cells --
49 chr2:11895000-11904600 Weak transcription Rectal Smooth Muscle rectum
50 chr2:11895000-11904600 Weak transcription Hela-S3 cervix

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Last update: Aug 31, 2015