Variant report

Variant	rs4917688
Chromosome Location	chr10:97198800-97198801
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:97196672..97199755-chr10:97214969..97217951,3	K562	blood:
2	chr10:97190432..97193993-chr10:97195559..97198932,4	K562	blood:

Extended variants
information (count: 31 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs10450393	0.95[ASN][1000 genomes]
rs10736088	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10786207	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10786208	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10786209	0.83[ASN][1000 genomes]
rs10786211	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10882594	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10882595	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10882596	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10882597	0.90[AFR][1000 genomes];0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10882598	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11188323	1.00[ASN][1000 genomes]
rs1327557	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1327558	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1536555	0.86[EUR][1000 genomes]
rs2025849	0.97[ASN][1000 genomes]
rs2025850	0.97[ASN][1000 genomes]
rs2031765	1.00[ASN][1000 genomes]
rs4918929	0.97[ASN][1000 genomes]
rs4918931	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4918932	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4918933	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4918934	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4918935	0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4918936	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6584001	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7086989	1.00[ASN][1000 genomes]
rs7088765	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs732101	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs732102	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9633700	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:70 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:97158600-97199600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr10:97169600-97204800	Weak transcription	Rectal Mucosa Donor 31	rectum
3	chr10:97171000-97208000	Weak transcription	HUES64 Cell Line	embryonic stem cell
4	chr10:97175800-97204000	Weak transcription	Psoas Muscle	Psoas
5	chr10:97176000-97199200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
6	chr10:97178800-97198800	Genic enhancers	Colon Smooth Muscle	Colon
7	chr10:97185800-97205000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
8	chr10:97187200-97205400	Weak transcription	K562	blood
9	chr10:97189200-97205000	Weak transcription	Esophagus	oesophagus
10	chr10:97190200-97207200	Weak transcription	Colonic Mucosa	Colon
11	chr10:97190600-97200400	Strong transcription	Fetal Intestine Small	intestine
12	chr10:97190800-97201400	Weak transcription	Sigmoid Colon	Sigmoid Colon
13	chr10:97190800-97208200	Weak transcription	H1 Cell Line	embryonic stem cell
14	chr10:97191000-97199400	Weak transcription	Stomach Mucosa	stomach
15	chr10:97191000-97204800	Weak transcription	Duodenum Mucosa	Duodenum
16	chr10:97192000-97200000	Strong transcription	HepG2	liver
17	chr10:97193400-97210800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
18	chr10:97193800-97200600	Strong transcription	Fetal Intestine Large	intestine
19	chr10:97193800-97208000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
20	chr10:97194400-97198800	Genic enhancers	Rectal Smooth Muscle	rectum
21	chr10:97194800-97200400	Genic enhancers	Left Ventricle	heart
22	chr10:97195000-97199600	Strong transcription	Cortex derived primary cultured neurospheres	brain
23	chr10:97195000-97200000	Weak transcription	Duodenum Smooth Muscle	Duodenum
24	chr10:97195200-97204400	Weak transcription	Fetal Brain Male	brain
25	chr10:97195400-97200800	Strong transcription	Fetal Stomach	stomach
26	chr10:97195400-97204800	Weak transcription	Fetal Lung	lung
27	chr10:97195600-97200000	Genic enhancers	Stomach Smooth Muscle	stomach
28	chr10:97195600-97200800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
29	chr10:97195800-97200000	Weak transcription	Pancreas	Pancrea
30	chr10:97195800-97204800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
31	chr10:97195800-97204800	Weak transcription	Spleen	Spleen
32	chr10:97195800-97205000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
33	chr10:97196000-97204600	Weak transcription	Adipose Nuclei	Adipose
34	chr10:97196200-97198800	Strong transcription	Lung	lung
35	chr10:97196800-97198800	Enhancers	Right Atrium	heart
36	chr10:97197000-97200200	Genic enhancers	Skeletal Muscle Female	skeletal muscle
37	chr10:97197200-97199600	Genic enhancers	Skeletal Muscle Male	skeletal muscle
38	chr10:97197400-97200800	Weak transcription	Brain Anterior Caudate	brain
39	chr10:97197400-97200800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
40	chr10:97197400-97204600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
41	chr10:97197400-97204600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
42	chr10:97197400-97204600	Weak transcription	Brain Cingulate Gyrus	brain
43	chr10:97197400-97204800	Weak transcription	Brain Substantia Nigra	brain
44	chr10:97197400-97204800	Weak transcription	Rectal Mucosa Donor 29	rectum
45	chr10:97197400-97204800	Weak transcription	HSMMtube	muscle
46	chr10:97197600-97200000	Weak transcription	Brain Angular Gyrus	brain
47	chr10:97197600-97200400	Enhancers	Right Ventricle	heart
48	chr10:97197600-97201000	Genic enhancers	Breast Myoepithelial Primary Cells	Breast
49	chr10:97197600-97201400	Weak transcription	Gastric	stomach
50	chr10:97197600-97202800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland

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