Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:119770243..119773277-chr11:119775684..119777431,3	K562	blood:
2	chr11:119772072..119774350-chr11:119798374..119800942,2	K562	blood:

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs11217608	1.00[ASN][1000 genomes]
rs11600005	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17123461	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17123466	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4403813	1.00[ASN][1000 genomes]
rs550764	1.00[ASN][1000 genomes]
rs55895660	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56816645	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61897867	1.00[ASN][1000 genomes]
rs61899013	1.00[EUR][1000 genomes]
rs61899017	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61899019	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61899020	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61899021	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61899023	0.85[EUR][1000 genomes]
rs61899043	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs657317	1.00[ASN][1000 genomes]
rs7105596	1.00[ASN][1000 genomes]
rs72994637	0.82[EUR][1000 genomes]
rs72994672	1.00[ASN][1000 genomes]
rs7925677	1.00[ASN][1000 genomes]
rs964104	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1051526	chr11:119750335-119775811	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv1038232	chr11:119759344-119785065	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Bivalent/Poised TSS	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv1044698	chr11:119767614-119789683	Enhancers Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Strong transcription	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
4	nsv1051760	chr11:119770181-119789683	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Strong transcription Bivalent/Poised TSS	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
5	nsv1048084	chr11:119771748-119808864	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Strong transcription ZNF genes & repeats Bivalent/Poised TSS	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:119763000-119780800	Weak transcription	Right Atrium	heart
2	chr11:119765800-119773800	Weak transcription	Esophagus	oesophagus
3	chr11:119768000-119778000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr11:119768600-119773200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr11:119768800-119773800	Weak transcription	Placenta	Placenta
6	chr11:119772000-119773200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr11:119772000-119773200	Enhancers	Fetal Intestine Large	intestine
8	chr11:119772600-119775800	Enhancers	Stomach Mucosa	stomach
9	chr11:119772600-119779800	Enhancers	Liver	Liver
10	chr11:119772800-119774400	Weak transcription	Brain Germinal Matrix	brain
11	chr11:119773000-119773600	Flanking Active TSS	Fetal Intestine Small	intestine
12	chr11:119773000-119773600	Weak transcription	Gastric	stomach
13	chr11:119773000-119773800	Active TSS	Duodenum Mucosa	Duodenum
14	chr11:119773000-119774200	Weak transcription	Pancreas	Pancrea

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