Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10742138	0.81[EUR][1000 genomes]
rs10742139	0.82[EUR][1000 genomes]
rs11029555	0.90[EUR][1000 genomes]
rs16915655	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1845355	0.91[ASN][1000 genomes]
rs2029712	0.81[EUR][1000 genomes]
rs2126183	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2169338	1.00[ASN][1000 genomes]
rs2169339	0.99[ASN][1000 genomes]
rs4444034	0.89[ASN][1000 genomes]
rs58872250	0.89[ASN][1000 genomes]
rs61877726	0.89[ASN][1000 genomes]
rs61877727	0.89[ASN][1000 genomes]
rs67498125	0.87[ASN][1000 genomes]
rs7107402	0.82[EUR][1000 genomes]
rs7107710	0.80[EUR][1000 genomes]
rs7108703	0.90[EUR][1000 genomes]
rs7115101	0.84[EUR][1000 genomes]
rs7123118	0.90[EUR][1000 genomes]
rs7123359	0.88[EUR][1000 genomes]
rs7127048	0.93[ASN][1000 genomes]
rs7129064	0.98[ASN][1000 genomes]
rs716700	0.89[ASN][1000 genomes]
rs72886266	0.95[ASN][1000 genomes]
rs72886272	0.93[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2422406	chr11:26329870-26473641	Flanking Bivalent TSS/Enh Enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Weak transcription ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:26441800-26442400	Enhancers	iPS-18 Cell Line	embryonic stem cell
2	chr11:26442000-26442600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
3	chr11:26442200-26442600	Flanking Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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