Variant report

Variant	rs56159937
Chromosome Location	chr21:40000184-40000185
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr21:39883776..39884562-chr21:40000183..40000776,2	MCF-7	breast:
2	chr21:39998710..40001241-chr21:40002564..40005457,2	MCF-7	breast:

Extended variants
information (count: 25 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs17194186	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs17194207	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs17194214	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17285455	0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2212597	0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2212932	0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2836550	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2836566	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2836578	0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2836580	0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs28465589	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs28705162	0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs55651068	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs56871124	0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs58009060	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs59304931	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs60393496	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs60914381	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs62217496	0.80[AMR][1000 genomes];0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs973105	0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9974074	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9974176	0.88[ASN][1000 genomes]
rs9976303	0.81[EUR][1000 genomes]
rs9977881	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9980524	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:39995200-40002400	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr21:39996600-40000600	Weak transcription	Aorta	Aorta
3	chr21:39996600-40001800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr21:39999200-40000400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
5	chr21:39999400-40000200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
6	chr21:40000000-40001000	Enhancers	Breast Myoepithelial Primary Cells	Breast

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