The 2.0 version of rSNPBase

Variant report

Variant rs56823234
Chromosome Location chr13:79995841-79995842
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:79980800-80007200 Weak transcription Spleen Spleen
2 chr13:79981000-79997400 Weak transcription Lung lung
3 chr13:79981000-79997600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr13:79981000-79998000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
5 chr13:79981000-79998000 Weak transcription Ovary ovary
6 chr13:79981000-80007200 Weak transcription Aorta Aorta
7 chr13:79981200-79997600 Weak transcription Fetal Muscle Leg muscle
8 chr13:79981200-80010200 Weak transcription Right Ventricle heart
9 chr13:79981400-79997800 Weak transcription H1 Cell Line embryonic stem cell
10 chr13:79981400-80000200 Weak transcription Psoas Muscle Psoas
11 chr13:79981600-79996800 Weak transcription Duodenum Smooth Muscle Duodenum
12 chr13:79981600-79997600 Weak transcription Muscle Satellite Cultured Cells --
13 chr13:79981600-79997600 Weak transcription Skeletal Muscle Male skeletal muscle
14 chr13:79981600-79998000 Weak transcription Primary hematopoietic stem cells short term culture blood
15 chr13:79981600-79998200 Weak transcription Brain Cingulate Gyrus brain
16 chr13:79981600-79998200 Weak transcription Brain Hippocampus Middle brain
17 chr13:79981800-80001600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
18 chr13:79982000-79997200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr13:79982200-79997600 Weak transcription NHEK skin
20 chr13:79982200-79998000 Weak transcription Brain Anterior Caudate brain
21 chr13:79982400-79997600 Weak transcription Fetal Lung lung
22 chr13:79982600-80006400 Weak transcription Gastric stomach
23 chr13:79982800-79997600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr13:79982800-79998400 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr13:79982800-79998600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr13:79983000-79998600 Weak transcription Dnd41 blood
27 chr13:79983600-80003400 Weak transcription GM12878-XiMat blood
28 chr13:79984200-79997600 Weak transcription Liver Liver
29 chr13:79987800-79997000 Weak transcription Fetal Stomach stomach
30 chr13:79987800-80001400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr13:79988000-79998200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr13:79988400-79998000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
33 chr13:79988600-79997800 Weak transcription Primary T cells fromperipheralblood blood
34 chr13:79989400-79998200 Weak transcription Primary T cells from cord blood blood
35 chr13:79989400-79998200 Weak transcription Left Ventricle heart
36 chr13:79989600-79998200 Weak transcription Fetal Adrenal Gland Adrenal Gland
37 chr13:79994200-79996000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr13:79995600-79996600 Strong transcription Breast Myoepithelial Primary Cells Breast
39 chr13:79995800-79996600 Strong transcription Primary B cells from peripheral blood blood

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Last update: Aug 31, 2015