The 2.0 version of rSNPBase

Variant report

Variant rs59604922
Chromosome Location chr13:80080095-80080096
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:29 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:80064800-80084800 Weak transcription Fetal Intestine Small intestine
2 chr13:80066800-80084000 Weak transcription Pancreas Pancrea
3 chr13:80066800-80122800 Weak transcription Esophagus oesophagus
4 chr13:80067200-80095000 Weak transcription HSMM muscle
5 chr13:80070600-80096600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
6 chr13:80074400-80080600 Enhancers Primary T helper cells PMA-I stimulated --
7 chr13:80076000-80099200 Weak transcription Hela-S3 cervix
8 chr13:80076200-80082600 Weak transcription Osteobl bone
9 chr13:80076200-80093200 Weak transcription HMEC breast
10 chr13:80077600-80088800 Weak transcription Brain Angular Gyrus brain
11 chr13:80077600-80095600 Weak transcription Fetal Intestine Large intestine
12 chr13:80077800-80080200 Weak transcription NHEK skin
13 chr13:80077800-80082600 Weak transcription Small Intestine intestine
14 chr13:80077800-80082800 Weak transcription Right Atrium heart
15 chr13:80077800-80089000 Weak transcription Brain Inferior Temporal Lobe brain
16 chr13:80078000-80082400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr13:80078000-80097200 Weak transcription Psoas Muscle Psoas
18 chr13:80078000-80097800 Weak transcription Ovary ovary
19 chr13:80078200-80082400 Weak transcription Fetal Adrenal Gland Adrenal Gland
20 chr13:80078200-80082600 Weak transcription Stomach Mucosa stomach
21 chr13:80078200-80088600 Weak transcription Fetal Heart heart
22 chr13:80078200-80102000 Weak transcription Right Ventricle heart
23 chr13:80078800-80085800 Enhancers Dnd41 blood
24 chr13:80079200-80080800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr13:80079400-80080400 Enhancers Primary T helper 17 cells PMA-I stimulated --
26 chr13:80079600-80086600 Weak transcription Gastric stomach
27 chr13:80079600-80098200 Weak transcription Sigmoid Colon Sigmoid Colon
28 chr13:80079800-80082600 Weak transcription Left Ventricle heart
29 chr13:80080000-80082200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015