The 2.0 version of rSNPBase

Variant report

Variant rs58088304
Chromosome Location chr13:80115468-80115469
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:80066800-80122800 Weak transcription Esophagus oesophagus
2 chr13:80083000-80120000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr13:80083000-80122800 Weak transcription Stomach Mucosa stomach
4 chr13:80087400-80134000 Weak transcription Aorta Aorta
5 chr13:80087400-80134600 Weak transcription Pancreas Pancrea
6 chr13:80089400-80118400 Weak transcription Small Intestine intestine
7 chr13:80097200-80122800 Weak transcription Fetal Lung lung
8 chr13:80097400-80121800 Weak transcription Lung lung
9 chr13:80098400-80123200 Weak transcription Fetal Kidney kidney
10 chr13:80098600-80135000 Weak transcription Placenta Placenta
11 chr13:80099400-80115600 Weak transcription Skeletal Muscle Male skeletal muscle
12 chr13:80099400-80133200 Weak transcription Psoas Muscle Psoas
13 chr13:80100400-80121600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
14 chr13:80100600-80136400 Weak transcription Duodenum Smooth Muscle Duodenum
15 chr13:80100800-80133200 Weak transcription Hela-S3 cervix
16 chr13:80101000-80123400 Weak transcription HMEC breast
17 chr13:80101800-80133200 Weak transcription Primary T cells from cord blood blood
18 chr13:80102200-80133600 Weak transcription Gastric stomach
19 chr13:80104800-80133600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
20 chr13:80105800-80115800 Weak transcription Brain Anterior Caudate brain
21 chr13:80108400-80132200 Weak transcription A549 lung
22 chr13:80109000-80121600 Weak transcription HSMMtube muscle
23 chr13:80109000-80123200 Weak transcription NH-A brain
24 chr13:80109000-80129400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
25 chr13:80109000-80133200 Weak transcription Fetal Adrenal Gland Adrenal Gland
26 chr13:80109000-80133200 Weak transcription HSMM muscle
27 chr13:80109200-80123000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr13:80109200-80123000 Weak transcription Fetal Heart heart
29 chr13:80109200-80133200 Weak transcription Muscle Satellite Cultured Cells --
30 chr13:80109600-80116400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
31 chr13:80109600-80123200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr13:80109600-80133200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr13:80109800-80128000 Weak transcription NHDF-Ad bronchial
34 chr13:80109800-80131600 Weak transcription Rectal Mucosa Donor 31 rectum
35 chr13:80110000-80122800 Weak transcription Pancreatic Islets Pancreatic Islet
36 chr13:80110600-80117600 Weak transcription ES-I3 Cell Line embryonic stem cell
37 chr13:80110600-80118200 Weak transcription HUES6 Cell Line embryonic stem cell
38 chr13:80110600-80133200 Weak transcription Brain Inferior Temporal Lobe brain
39 chr13:80111400-80116200 Weak transcription Fetal Stomach stomach
40 chr13:80112400-80117800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr13:80112600-80122800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr13:80112600-80131800 Weak transcription Sigmoid Colon Sigmoid Colon
43 chr13:80112600-80133200 Weak transcription Osteobl bone
44 chr13:80113000-80115600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
45 chr13:80113200-80119800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
46 chr13:80113200-80123600 Weak transcription Breast Myoepithelial Primary Cells Breast
47 chr13:80113200-80123600 Weak transcription Fetal Intestine Small intestine
48 chr13:80113200-80131600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr13:80113200-80133800 Weak transcription Left Ventricle heart
50 chr13:80114400-80115800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015