The 2.0 version of rSNPBase

Variant report

Variant rs57711234
Chromosome Location chr8:102788462-102788463
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:34 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:102769600-102803000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
2 chr8:102774200-102790200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
3 chr8:102774600-102799600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
4 chr8:102777600-102798000 Weak transcription Fetal Stomach stomach
5 chr8:102780200-102799600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr8:102781600-102801000 Weak transcription Liver Liver
7 chr8:102783000-102792600 Weak transcription Duodenum Smooth Muscle Duodenum
8 chr8:102783000-102799600 Weak transcription Brain Substantia Nigra brain
9 chr8:102783600-102788800 Weak transcription Ovary ovary
10 chr8:102783600-102799400 Weak transcription Adipose Nuclei Adipose
11 chr8:102783600-102800800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
12 chr8:102784000-102793400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
13 chr8:102784000-102799000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr8:102784200-102790600 Strong transcription Fetal Muscle Trunk muscle
15 chr8:102784200-102802200 Weak transcription Stomach Smooth Muscle stomach
16 chr8:102785200-102788600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr8:102785400-102788600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr8:102785800-102795800 Weak transcription Breast Myoepithelial Primary Cells Breast
19 chr8:102786000-102791600 Weak transcription Pancreatic Islets Pancreatic Islet
20 chr8:102786400-102789800 Strong transcription Cortex derived primary cultured neurospheres brain
21 chr8:102786400-102796000 Weak transcription Primary T killer memory cells from peripheral blood blood
22 chr8:102787000-102788800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr8:102787000-102798400 Weak transcription Aorta Aorta
24 chr8:102787200-102789200 Weak transcription Skeletal Muscle Female skeletal muscle
25 chr8:102787400-102802400 Weak transcription Brain Cingulate Gyrus brain
26 chr8:102787600-102798000 Weak transcription Pancreas Pancrea
27 chr8:102787800-102802600 Weak transcription Right Ventricle heart
28 chr8:102788000-102788600 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr8:102788000-102788800 Weak transcription Psoas Muscle Psoas
30 chr8:102788000-102790000 Strong transcription Fetal Muscle Leg muscle
31 chr8:102788000-102795000 Weak transcription Lung lung
32 chr8:102788200-102788800 Weak transcription Right Atrium heart
33 chr8:102788200-102789200 Weak transcription Left Ventricle heart
34 chr8:102788200-102795800 Weak transcription Skeletal Muscle Male skeletal muscle

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Last update: Aug 31, 2015