Variant report

Variant	rs1111932
Chromosome Location	chr8:102782540-102782541
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 36 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:36)

rs_ID	r²[population]
rs10108160	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10110736	0.90[CHB][hapmap];0.85[JPT][hapmap];0.90[ASN][1000 genomes]
rs16868341	0.90[CHB][hapmap];0.85[JPT][hapmap];0.88[ASN][1000 genomes]
rs16868354	0.82[CHB][hapmap];0.82[JPT][hapmap];0.88[ASN][1000 genomes]
rs16868356	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs16868359	0.90[CHB][hapmap];0.85[JPT][hapmap];0.88[ASN][1000 genomes]
rs16868362	0.90[CHB][hapmap];0.85[JPT][hapmap];0.88[ASN][1000 genomes]
rs16868373	0.90[CHB][hapmap];0.85[JPT][hapmap];0.90[ASN][1000 genomes]
rs16868374	0.90[CHB][hapmap];0.85[JPT][hapmap];0.90[ASN][1000 genomes]
rs16868417	0.80[CHB][hapmap];0.85[JPT][hapmap];0.90[ASN][1000 genomes]
rs16868423	1.00[CEU][hapmap]
rs16868425	0.90[CHB][hapmap];0.85[JPT][hapmap];0.91[ASN][1000 genomes]
rs16868426	0.90[CHB][hapmap];0.85[JPT][hapmap];0.91[ASN][1000 genomes]
rs16868430	0.90[CHB][hapmap];0.88[ASN][1000 genomes]
rs56008120	1.00[EUR][1000 genomes]
rs56907672	0.88[ASN][1000 genomes]
rs57368614	0.88[ASN][1000 genomes]
rs57711234	0.93[ASN][1000 genomes]
rs58181251	0.83[EUR][1000 genomes]
rs58241619	0.86[ASN][1000 genomes]
rs59573144	0.83[EUR][1000 genomes]
rs60235320	1.00[EUR][1000 genomes]
rs60677697	0.88[ASN][1000 genomes]
rs61460942	1.00[EUR][1000 genomes]
rs61534404	1.00[EUR][1000 genomes]
rs6984466	0.90[CHB][hapmap];0.90[ASN][1000 genomes]
rs6986790	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs73275514	0.88[ASN][1000 genomes]
rs73699584	0.88[ASN][1000 genomes]
rs73699930	0.88[ASN][1000 genomes]
rs73699931	0.88[ASN][1000 genomes]
rs73699933	0.88[ASN][1000 genomes]
rs73699935	0.88[ASN][1000 genomes]
rs73699938	0.88[ASN][1000 genomes]
rs73699960	1.00[EUR][1000 genomes]
rs9642973	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]

No data

Chromatin state (count:42 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:102769600-102803000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
2	chr8:102770600-102786800	Weak transcription	Esophagus	oesophagus
3	chr8:102772800-102783400	Weak transcription	Aorta	Aorta
4	chr8:102772800-102786800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
5	chr8:102774200-102782600	Weak transcription	Fetal Kidney	kidney
6	chr8:102774200-102790200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
7	chr8:102774600-102799600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
8	chr8:102777200-102785200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
9	chr8:102777400-102782800	Weak transcription	Psoas Muscle	Psoas
10	chr8:102777600-102782600	Weak transcription	Duodenum Smooth Muscle	Duodenum
11	chr8:102777600-102798000	Weak transcription	Fetal Stomach	stomach
12	chr8:102778000-102783400	Weak transcription	Stomach Smooth Muscle	stomach
13	chr8:102778200-102782800	Weak transcription	Right Atrium	heart
14	chr8:102778200-102782800	Weak transcription	Right Ventricle	heart
15	chr8:102778200-102786800	Weak transcription	Brain Angular Gyrus	brain
16	chr8:102778400-102782800	Weak transcription	Ovary	ovary
17	chr8:102780200-102799600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
18	chr8:102780600-102785600	Weak transcription	Pancreatic Islets	Pancreatic Islet
19	chr8:102781400-102782800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
20	chr8:102781600-102782800	Weak transcription	Fetal Muscle Trunk	muscle
21	chr8:102781600-102783600	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
22	chr8:102781600-102783800	Enhancers	Cortex derived primary cultured neurospheres	brain
23	chr8:102781600-102801000	Weak transcription	Liver	Liver
24	chr8:102781800-102782800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
25	chr8:102781800-102784200	Enhancers	Fetal Brain Male	brain
26	chr8:102782000-102782800	Enhancers	Brain Inferior Temporal Lobe	brain
27	chr8:102782000-102782800	Enhancers	Fetal Brain Female	brain
28	chr8:102782000-102783000	Enhancers	Brain Substantia Nigra	brain
29	chr8:102782000-102783600	Enhancers	Adipose Nuclei	Adipose
30	chr8:102782000-102783600	Enhancers	Brain Cingulate Gyrus	brain
31	chr8:102782000-102783600	Enhancers	Fetal Muscle Leg	muscle
32	chr8:102782000-102783800	Genic enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
33	chr8:102782000-102783800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
34	chr8:102782000-102784200	Enhancers	Breast Myoepithelial Primary Cells	Breast
35	chr8:102782200-102782800	Enhancers	Fetal Lung	lung
36	chr8:102782200-102782800	Weak transcription	Left Ventricle	heart
37	chr8:102782200-102783000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
38	chr8:102782200-102783000	Enhancers	Brain Hippocampus Middle	brain
39	chr8:102782200-102783400	Enhancers	Brain Germinal Matrix	brain
40	chr8:102782200-102783600	Enhancers	Brain Anterior Caudate	brain
41	chr8:102782200-102784000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
42	chr8:102782400-102782600	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain

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