Variant report

Variant	rs16868373
Chromosome Location	chr8:102779163-102779164
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:102778531..102781884-chr8:102783366..102786443,4	K562	blood:
2	chr8:102778531..102781884-chr8:102783366..102786443,5	K562	blood:
3	chr8:102779158..102781376-chr8:102783075..102786085,3	MCF-7	breast:

Extended variants
information (count: 33 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs10108160	0.90[CHB][hapmap];0.85[JPT][hapmap];0.90[ASN][1000 genomes]
rs10110736	1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs1073027	0.81[CHB][hapmap];0.84[CHD][hapmap];0.93[GIH][hapmap];0.85[JPT][hapmap]
rs10955272	1.00[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs10955273	1.00[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs1111932	0.90[CHB][hapmap];0.85[JPT][hapmap];0.90[ASN][1000 genomes]
rs1113543	0.81[CHB][hapmap];0.84[CHD][hapmap];0.93[GIH][hapmap];0.85[JPT][hapmap];0.85[LWK][hapmap];1.00[MEX][hapmap];0.84[AMR][1000 genomes]
rs16868341	1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs16868354	1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs16868359	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.85[LWK][hapmap];1.00[MEX][hapmap];1.00[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs16868362	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.98[ASN][1000 genomes]
rs16868374	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs16868417	0.90[CHB][hapmap];0.94[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.84[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs16868423	0.88[GIH][hapmap]
rs16868425	1.00[CHB][hapmap];0.89[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.98[ASN][1000 genomes]
rs16868426	1.00[CHB][hapmap];0.89[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.85[LWK][hapmap];1.00[MEX][hapmap];0.95[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs16868430	1.00[CHB][hapmap];0.85[JPT][hapmap];0.85[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs16868487	0.82[JPT][hapmap]
rs56907672	1.00[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs57368614	1.00[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs57711234	0.84[ASN][1000 genomes]
rs58241619	0.89[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs58303849	0.84[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs60677697	1.00[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs6984466	1.00[CHB][hapmap];0.85[JPT][hapmap];0.96[ASN][1000 genomes]
rs73275514	0.98[ASN][1000 genomes]
rs73699584	1.00[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs73699930	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs73699931	0.95[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs73699933	0.95[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs73699935	1.00[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs73699938	1.00[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs9642973	1.00[CHB][hapmap];0.85[JPT][hapmap];1.00[ASN][1000 genomes]

No data

Chromatin state (count:37 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:102761400-102781000	Weak transcription	Liver	Liver
2	chr8:102769600-102803000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
3	chr8:102770600-102786800	Weak transcription	Esophagus	oesophagus
4	chr8:102772800-102783400	Weak transcription	Aorta	Aorta
5	chr8:102772800-102786800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
6	chr8:102774200-102779600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
7	chr8:102774200-102782000	Weak transcription	Brain Cingulate Gyrus	brain
8	chr8:102774200-102782200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr8:102774200-102782200	Weak transcription	Brain Anterior Caudate	brain
10	chr8:102774200-102782600	Weak transcription	Fetal Kidney	kidney
11	chr8:102774200-102790200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
12	chr8:102774600-102799600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
13	chr8:102775400-102781600	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
14	chr8:102775600-102781000	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
15	chr8:102777200-102785200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
16	chr8:102777400-102782800	Weak transcription	Psoas Muscle	Psoas
17	chr8:102777600-102782600	Weak transcription	Duodenum Smooth Muscle	Duodenum
18	chr8:102777600-102798000	Weak transcription	Fetal Stomach	stomach
19	chr8:102777800-102781600	Weak transcription	Brain Germinal Matrix	brain
20	chr8:102778000-102779600	Weak transcription	Pancreatic Islets	Pancreatic Islet
21	chr8:102778000-102782000	Weak transcription	Brain Substantia Nigra	brain
22	chr8:102778000-102782000	Weak transcription	Fetal Brain Female	brain
23	chr8:102778000-102782000	Weak transcription	Left Ventricle	heart
24	chr8:102778000-102782200	Weak transcription	Brain Hippocampus Middle	brain
25	chr8:102778000-102783400	Weak transcription	Stomach Smooth Muscle	stomach
26	chr8:102778200-102781600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
27	chr8:102778200-102781800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
28	chr8:102778200-102782000	Weak transcription	Brain Inferior Temporal Lobe	brain
29	chr8:102778200-102782800	Weak transcription	Right Atrium	heart
30	chr8:102778200-102782800	Weak transcription	Right Ventricle	heart
31	chr8:102778200-102786800	Weak transcription	Brain Angular Gyrus	brain
32	chr8:102778400-102779600	Weak transcription	Cortex derived primary cultured neurospheres	brain
33	chr8:102778400-102779800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
34	chr8:102778400-102779800	Weak transcription	Fetal Muscle Leg	muscle
35	chr8:102778400-102781800	Weak transcription	Fetal Brain Male	brain
36	chr8:102778400-102782800	Weak transcription	Ovary	ovary
37	chr8:102778800-102781600	Strong transcription	Fetal Muscle Trunk	muscle

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